G132868


Basic Information

Item Value
gene id G132868
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 9787856 ~ 9788078 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151092
ATTTTAAATCAGAAGTGAACTAATCCTTTAATAAATACTGTAAGAAATGTATTGCTCATTGTTAGTTTGTTAATGAATTAACTAATGTTAATAAATGAGACCTTACTGTAAAGTTACCTTTTTTCAAAAAAACTTTATGGGTGAGCAGGGATGTTTGTATCACTTTTTGGTTTTTGTTAATTTATTCCCCCAAAAAAATTAACCTAAAGTTTGGAAAATTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151092 True 223 lncRNA 0.26 1 9787856 9788078

Neighbor

gene id symbol gene type direction distance location
CI01000026_09666763_09669325 NA coding upstream 118154 9666680 ~ 9669702 (+)
CI01000026_09602263_09635635 TOX3 coding upstream 150862 9601643 ~ 9636994 (+)
CI01000026_09365911_09428712 CHD9 coding upstream 358780 9364907 ~ 9429076 (+)
CI01000026_09339450_09352303 AKTIP coding upstream 434679 9339450 ~ 9353177 (+)
CI01000026_09175446_09178464 NA coding upstream 609368 9175249 ~ 9178488 (+)
CI01000026_09900193_09906874 SALL1A, SALL1 coding downstream 112115 9900193 ~ 9907237 (+)
CI01000026_09915483_09917692 NA coding downstream 127367 9915445 ~ 9917919 (+)
CI01000026_10124232_10124468 NA coding downstream 335838 10123916 ~ 10125835 (+)
CI01000026_10136110_10149386 BRD7 coding downstream 347918 10135996 ~ 10149466 (+)
CI01000026_10200749_10202405 NA coding downstream 410515 10198593 ~ 10202514 (+)
G132867 NA non-coding upstream 286 9787332 ~ 9787570 (+)
G132783 NA non-coding upstream 113930 9673662 ~ 9673926 (+)
G132667 NA non-coding upstream 218752 9568739 ~ 9569160 (+)
G132664 NA non-coding upstream 224871 9562777 ~ 9562985 (+)
G132659 NA non-coding upstream 235302 9552354 ~ 9552554 (+)
G132879 NA non-coding downstream 15264 9803342 ~ 9803600 (+)
G132888 NA non-coding downstream 29608 9817686 ~ 9817965 (+)
G132908 NA non-coding downstream 50937 9839015 ~ 9839264 (+)
G132916 NA non-coding downstream 61156 9849234 ~ 9849703 (+)
G132800 NA non-coding downstream 131308 9919386 ~ 9920088 (+)
G131077 NA other upstream 1281069 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 1488442 8297857 ~ 8307629 (+)
G130967 NA other upstream 1598783 8188374 ~ 8189073 (+)
G130552 NA other upstream 2691204 7095053 ~ 7096652 (+)
G133192 NA other downstream 371741 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 1282690 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 1456855 11241496 ~ 11246204 (+)
G133542 NA other downstream 1688039 11476117 ~ 11477544 (+)

Expression


Co-expression Network