CI01000027_04485614_04488056


Basic Information

Item Value
gene id CI01000027_04485614_04488056
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4483891 ~ 4488056 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_04485614_04488056.mRNA
CTATAAAATTGGTCCATAGGGCTCATACGCACTCAAATAGCATTTGAGTGAGGGCATTTCATTGGTTTAATCTACTGAAGGGATGGGCACAGTGTGTACTGCGAACAATATTTGCAGCAACACTTTTTTTTTTTTTTTTTTTTTGTGAATAAACTAGGTCAGGGGTCTTCAGCAGTGGATAGGCCTATGCAGCATTGTTTTCGCCCAAATTAATTTTACAGAATGAATGAATGAATGAATTTATTTGTTTATTTGTTTGTTTATTAAATAAGTAAATATGCGCTAAATTAAAAAAACAATATTAAATCAATTTGGACAACGTTGGCATGTCCAGCAGTTGACAATAATAATAATAATAATAATAAATACTACATTTATGCATTTTCCGGATACTTTTATCCAAAGCGACTAGAAAAGCAATTAGATCAGGAGCCAAAAATATTCGTAATATACAATGCCAGGTTTAGGCTACTTGATAGCTAGGTTATGAAGCAGGTAGAGAAGAGGAGAAATGCAGTTTTGTTTTTTTGTTTTTTAAAGAATTTCCTGCTTGCTAGGAAGCATTTCCTGCTTGCTGCTTGCTAGGAAATGCTTAAATTGCACTTATTGGAATAATCATCTTAATTTAACAAATGATAATAAGCACTTTTTTAAATAGCTGGAATTATTCAAAGACTCATTACGTCCAATCATGCACTCTCGTGTCGCCACCTATGTAACACGCAGAAAGAATGACTGAATGAATCAGTCAATGAATCGTTGTGTTGAACCGATTCAAAAGATTCGAATCACTAAGATTATTCAAAATCCCCACCGCTAGAGGGAACCCATGGTTTGACTCTACTTTTTCTCTTCCGGGTTTGGGGACTACAAACTGACAGTGCATAGAGGATGCAAGGCCACTAAGAGCAATCATTTGTTCAGATTCAAGCTAATCGTTAACCAGTTTACAGTACAATAATTCAAACAGCAGACCAGATATTTTAATAGAGATAAGAGAAACACTATATAGAATTAAAATAATGGGGCTTATGGTGGTATTTTTGTGGATACCAGCACATAACGGAGTTAAAGAAAATTAAAAGGCAGATAAAATAGAAAAGGAAGTTACTAAAAGTAATCACATTGATTTTAGTATCAGTAGGGCAGAAATCAAGAGTATTATTAAAAAGAGATTGAAGGACAGATGGTAAAGGCAATGGGAAGAAACAAGAAAAGGGCAATAGTTTCATAGGATTCAAAGGAAAGTGGGAGAAATGAGGTATACAGGGAGGAATAGGAGGGAAGAGATAATAGTATCAAGGCTTAGGTTTGGACACACTGTTTAAAATAGGTAAACATAACACAGGGAAATGTGATTTCTGTGGTCAGAAAGAGACGGTAGAACATGTTATGATATATTGTCCGAAATATGAAACAAATAAGACATTTAATTAGGAAATTAGGAGAGATGAACACGTTTTGATTTAATAGATATTCTGAGAAAAGAGTCAAAATATATGTGTTATAATCTATTGTTTCAATATCTTAGAGAAACTAATTTATTCTGGTCCACACTCCATACCAGTTGGTGGCGGAATGCACCAGTAAGTTGTTTGCCAACCGCCAATAAACCCAAGAAGAAGAAGAAGGAGAAGGACTACAAACTGAGTAGCTGTTTTCACAACAGAGAAGAAAGTGCACGCAAACTTTATTGGTTGCGCGTGGCGGTGGATTTTTCAAAATGGTGCGCGTGTGTGCTTATCCTGGATGCTTCAACCGAGAGAAATCATTGAGACTCCGTCAGTGGGCATCAATGCAGGAGGAAAGTTTGACTTTTCACACATTGCCCCTGCATGATCTAAAACGATTGAATCGGTGGCTGCTCGCTCTTCGTCGAGATAGATCACCCATTCAGTCTATCCGTGGATTGAGGGTGTGCAGCGAACATTTTTCACCAGCCGATTTTAGTGTAGCCAAAGGAAATAAAAGACGATTGAAATCAACAGCTGTACCCAAGCTGTTTGTACAACAACAAACTGAGGCATTGCCTAAGATTAGGAGAGCAGTTAAGAGGGTTCAGCAAGTCGGAGCCCAAATCATCCCAATGGCTCAGAACTGCAATGCATCCTCCACGCAGAAAGATGGTGCTGTCACAGCAGCTATTCTCATCATAGGAGATGAGATCCTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_04485614_04488056.mRNA True 2173 mRNA 0.37 2 4483891 4488056

Neighbor

gene id symbol gene type direction distance location
CI01000027_04470309_04483532 NA coding upstream 332 4470145 ~ 4483559 (+)
CI01000027_04381523_04393547 CHRNB2B coding upstream 89777 4381523 ~ 4394114 (+)
CI01000027_04350540_04357555 SHE coding upstream 125792 4350014 ~ 4358099 (+)
CI01000027_04213570_04229519 PTPN23, PTPN23A coding upstream 254214 4212498 ~ 4229677 (+)
CI01000027_04054186_04103227 NA coding upstream 379471 4053038 ~ 4104420 (+)
CI01000027_04488278_04495470 FLAD1 coding downstream 222 4488278 ~ 4496077 (+)
CI01000027_04497623_04499224 NA coding downstream 9567 4497623 ~ 4499348 (+)
CI01000027_04537765_04549872 NA coding downstream 49286 4537342 ~ 4549929 (+)
CI01000027_04551022_04551875 NA coding downstream 62656 4550712 ~ 4551993 (+)
CI01000027_04655825_04667764 NA coding downstream 166727 4654783 ~ 4667867 (+)
G140465 NA non-coding upstream 53198 4428037 ~ 4430693 (+)
G140495 NA non-coding upstream 69315 4414354 ~ 4414576 (+)
G140447 NA non-coding upstream 70822 4404326 ~ 4413069 (+)
G140490 NA non-coding upstream 80803 4401489 ~ 4403088 (+)
G140489 NA non-coding upstream 121634 4362049 ~ 4362257 (+)
G140509 NA non-coding downstream 16798 4504854 ~ 4505152 (+)
G140512 NA non-coding downstream 25354 4513410 ~ 4513585 (+)
G140522 NA non-coding downstream 183051 4671107 ~ 4671477 (+)
G140587 NA non-coding downstream 204078 4692134 ~ 4692704 (+)
G140596 NA non-coding downstream 220169 4708225 ~ 4708506 (+)
G138953 NA other upstream 963826 3502072 ~ 3520065 (+)
G138915 NA other upstream 997244 3484387 ~ 3486647 (+)
G138515 NA other upstream 2807031 1664408 ~ 1676860 (+)
G138436 NA other upstream 2976075 1506961 ~ 1507816 (+)
G138290 NA other upstream 3484710 995970 ~ 999181 (+)
G140436 NA other downstream 249342 4737398 ~ 4774262 (+)
G140440 NA other downstream 292361 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 560867 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 581296 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 584006 5071693 ~ 5073136 (+)

Expression


Co-expression Network