XLOC_008893


Basic Information

Item Value
gene id XLOC_008893
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 813096 ~ 815019 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019100
atgaatttaatgtttacaatgcaaatcctattagatCTATTTATTTGGTGAACAAGGAAAGTTTCtcataatatctctactaaaagacagaaaatatgactttacaaactgttctgtaaataaatcatataaatattataatattactattaatatatcacaataatattagtgaaattaatttaaaaactgaataaatataaatttgcacacatttacacatgtaaATACATGGACTCAATgatgcacgcgcagattccgtgtgggcctactcatgacCTGCGTCCTGCCTATGAAACTCCACACTAATGATTCCTGATTTGGTtgtcttagaatCCTCTCCTGAAAGATAATCAAGTTTTACGTTCTGAATCGTCTTCCACATTGAAAACAAACCCCCAGTGTGAATGTTCATGTGTCTTGAGAGATTTAAAGTTCTTGCCACAATCCACAGGTGTGAGGCTTCTAACCAGAATAAACCACCACATGAGAATCAAGGTAAAATCTATTTCTGAAGCTCCACAgtgtccacactgttggcatgttcAATGCTTCTCTCTTTAGTGTGAACTTTCCTTTTAAGGTGTCTTGTAAGATTTGTTTTAGTAGTGAAACTCTGTCCACACTGCTGGCAAGTGTACGGCTTTGTTCCAGTGTGAGTCCTCATATGTTCTGACAGGTTTTTTTTCCAtatgaaactctttccacagttCTGGCAGGTGAACGGCttttctccggtgtgaatcctcatgtgttctACAAAGTATTGATTCccgctgaaactctttccacactgttggcaggtgTACAGATTTTCTCCAGTGTGAAACTTCATATGTTTTGTAAGATTTTGCTTCCAGATGAAACTCTTCTCGCACTGTTGGCAATTGTAAGGCATTTTCCCTGAGTGAAAGTTCATATGCTCTGTAAGGTTTTGTTTCCAagcgaaactctttccacactgttgacAATTGTAAGGCTTTTCCCTAGTGTGAACCCTCATATGGTGTGTAAGGTTTTGTTTGcaagtgaaactctttccacagtcTTGACAAGTGTACAGATTTTCTCCAGTGTGAAACTGCATATGTTTTTTAAGGCTTTGTTTCcaaACATCCCTCATCCTGATCCCCCTCTTCCTTTTCATTCTGATCTTGACCCTCCTCTTTGAGTGGCATC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019100 True 1179 lncRNA 0.38 3 813096 815019

Neighbor

gene id symbol gene type direction distance location
XLOC_008892 im:7143333 coding downstream 67424 742198 ~ 745672 (-)
XLOC_008891 si:dkey-7i4.19 coding downstream 73867 736522 ~ 739229 (-)
XLOC_008889 zgc:174574 coding downstream 108631 685007 ~ 704465 (-)
XLOC_008888 zgc:171901 coding downstream 128185 672984 ~ 684911 (-)
XLOC_008887 si:ch211-210b2.2 coding downstream 143620 665156 ~ 669476 (-)
XLOC_008894 NA coding upstream 3172 818191 ~ 848462 (-)
XLOC_008895 NA coding upstream 21996 837015 ~ 848792 (-)
XLOC_008896 NA coding upstream 54942 869961 ~ 909037 (-)
XLOC_008897 NA coding upstream 60309 875328 ~ 875985 (-)
XLOC_008898 NA coding upstream 62185 877204 ~ 908307 (-)
XLOC_008885 NA non-coding downstream 179688 622709 ~ 633408 (-)
XLOC_008874 NA non-coding downstream 383449 428419 ~ 429647 (-)
XLOC_008873 CABZ01056628.1 non-coding downstream 387340 425695 ~ 425756 (-)
XLOC_008871 NA non-coding downstream 434909 374380 ~ 378187 (-)
XLOC_008870 FP102887.1 non-coding downstream 463529 349451 ~ 349567 (-)

Expression


Co-expression Network