XLOC_008898


Basic Information

Item Value
gene id XLOC_008898
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 877204 ~ 908307 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019105
GGGGAATATGATCCCTGtcagttctcctaatctctcaGAGTAGCAAGCGGAACTTCGGTTCAGGGAGATTTATAGGTCCTCAGACTCCCCACCATTGTCAAGAGCAAACCTACACCCTTGGAAATCCCGGCACAGCTGGTCTGGTCTGGTCAGGATTTGCATGATGTAGTTGGAGCTGGTTACCAGGGGATACAGAAGCTAGAGGATGATGTTGTTGGCTGTGAATCCTTCCTGAGGCCTAGGCTCTTGGCAGAATTACAAATCTTTAACAGATTGTGAGAGTTCTGATGGACTGACCCGATTGCTTGGTACTTGCACACACAGATGTGAGGGGTCGCAGGATGCTTTGTGAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019105 True 353 lncRNA 0.49 2 877204 908307

Neighbor

gene id symbol gene type direction distance location
XLOC_008897 NA coding downstream 1219 875328 ~ 875985 (-)
XLOC_008895 NA coding downstream 28412 837015 ~ 848792 (-)
XLOC_008894 NA coding downstream 28742 818191 ~ 848462 (-)
XLOC_008893 NA coding downstream 62185 813096 ~ 815019 (-)
XLOC_008892 im:7143333 coding downstream 131532 742198 ~ 745672 (-)
XLOC_008900 si:dkey-77f5.14 coding upstream 11991 920298 ~ 923981 (-)
XLOC_008901 alox5b.1 coding upstream 34224 942531 ~ 952891 (-)
XLOC_008902 NA coding upstream 77837 986144 ~ 993587 (-)
XLOC_008903 NA coding upstream 99293 1007600 ~ 1008359 (-)
XLOC_008904 znf1010 coding upstream 109130 1017437 ~ 1022436 (-)
XLOC_008885 NA non-coding downstream 243796 622709 ~ 633408 (-)
XLOC_008908 NA non-coding upstream 232138 1140445 ~ 1143069 (-)
XLOC_008910 LO017713.1 non-coding upstream 413483 1321790 ~ 1321906 (-)
XLOC_008927 AL954387.2 non-coding upstream 1357662 2265969 ~ 2266083 (-)

Expression


Co-expression Network