XLOC_008899


Basic Information

Item Value
gene id XLOC_008899
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 899089 ~ 900879 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019106
GTTCTGATGGACTGACCCGATTGCTTGGTACTTGCACACACAGATGTGAGGGGTCGCAGGATGCTTTGTGAAGCTGCTTGAGGCTTGGTAAAATCAAGTTTTTGTAGATGTAACAAGACTTCTGGCAAGATGATTTCATTGACAAGGGCATGGGAAGGGGACAAAAGAGAAGCGTTCTcaaaaacctgtttttttttccctttgaaaaCTAACTTGTTTTTGGGATGCATTTAATTGCACCCTGTGATGACATCCTCTCCTCTTGTGTAAGTTATTACAGTGATTCCTGTCTATGAGTCTCCGCACTAATGAAATCTGAATTGGTTACATCTAATTGTGAATCCTTTCATGAAAACTAAGATTTACTTTTTGTCAAAAACACAGGTGTCAGGCTTTTATCCAGTATAAAGCATCACATGGGTATTAAGGGATTTTTTACATGCAAAGCTTattccacactgttggcaagtGAAGGCTTTTCTCctgtgtgaatcctcatgtgttttGTAAGGTTTCGTTTCCGTGTGAAACCCTTTCCACACTGTAGGCAGCTATAtcgtttttctccagtgtgaatcctcatatggGGTACAAGGTGATGTTTCcaagtgaaactctttccacaatgtAGGCAGGCATGTGGCTTTTCTCCATTGTGCATCCTTATATGGTCCTTAAAGTATTGTTTCTGTgagaaactctttccacaatgtTGGCAATTgtaaggcttttctccagtgtgaatcctcacaTGATCTTTAAGGGATCGTTTCCGTGAGAAACTCTTTTCACAATGTTGGCAATTgtaaggcttttctccagtgtgaatcctcacaTGGTCTGTAAGATGTTGTTTAtaagtgaaactctttccacaatgtTGGCAATTGAATGGTGTTTCttcagtgtgaatcctcatatggattgtaaaGTCTTTTTTCCAAGTGAAACTTTTTCCACAATGTAGGCAGATATTATGTTTTTCTTCATTGTGCATCTTCATATGGGCTGAAAGGTTTTGTTTCcgtgtaaaactctttccacaatgtTGGCAAGTgtaaggcttttctccagtgtgaatcctcaaaTGGGCTGAAAGGTTTTGTTTCcgtgtgaaactctttccacactggtgGCAGGTATAAGATTCGGCTGTTGTTTGTGATGAGGTCTTTGTCTGTTCTGATTTTTCTCTAGATCTGAAATCCAGACATTCCTCATGCTGATCCTTCTCTTCTACTTTGTTCTGATCTTGACTCTCCTCTTTGACTGGCATCAGGTTTTCTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019106 True 1287 lncRNA 0.40 2 899089 900879

Neighbor

gene id symbol gene type direction distance location
XLOC_008897 NA coding downstream 23104 875328 ~ 875985 (-)
XLOC_008895 NA coding downstream 50297 837015 ~ 848792 (-)
XLOC_008894 NA coding downstream 50627 818191 ~ 848462 (-)
XLOC_008893 NA coding downstream 84070 813096 ~ 815019 (-)
XLOC_008892 im:7143333 coding downstream 153417 742198 ~ 745672 (-)
XLOC_008900 si:dkey-77f5.14 coding upstream 19419 920298 ~ 923981 (-)
XLOC_008901 alox5b.1 coding upstream 41652 942531 ~ 952891 (-)
XLOC_008902 NA coding upstream 85265 986144 ~ 993587 (-)
XLOC_008903 NA coding upstream 106721 1007600 ~ 1008359 (-)
XLOC_008904 znf1010 coding upstream 116558 1017437 ~ 1022436 (-)
XLOC_008885 NA non-coding downstream 265681 622709 ~ 633408 (-)
XLOC_008908 NA non-coding upstream 239566 1140445 ~ 1143069 (-)
XLOC_008910 LO017713.1 non-coding upstream 420911 1321790 ~ 1321906 (-)
XLOC_008927 AL954387.2 non-coding upstream 1365090 2265969 ~ 2266083 (-)

Expression


Co-expression Network