XLOC_008903



Basic Information


Item Value
gene id XLOC_008903
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 1007600 ~ 1008359 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00019110
GTTTAGTTTTGTAGTTCACTCTACATATTTGGCAGGTGTAGAGCATCTTTCTGCTGTGAATGGTCAGGTGGCCTTCAAGAGCTGCTTTCTGAGTGAAACGCCTTCCACAGTGTTgacagctgaaaggcttctctccggtgtgaatcctcatgtgcaCCTTCATGTTCTCCTTGCTCACGAAACTCCTTCCACACTGATGGCAGACGAAAGGTTTCTCTCCGGAGTGAGTCCTCATGTGGGATGTGAAGTGTCCTTGTTGAGTAAACCTCTTTCCACACGTATGACAGgCAGGCGAAAGGTTTCTGTCCGGAGTGGGTCAACATGTGGGATGCAAAGTGTCCCTGTtgagtgaaactctttccacacgtATGGCAGGTAAATGgtctctctccggtgtgaatcctcatgtgggcTCTCAGGTTTTTATTTTCAGCAAAACTCCTTCCACACTGAAGGCAGGCGAAAGGTTTCTCTCCGGAGTGAGTCAACATGTGGGATGTGAAGTGTCCTCGTTGACTGAACCTTACTCCACATGTATGGCAGGTAAAACGCTTCACTCTAGTGTGAGTTTCCATGTGGGCATCAAGAGACCTTTTATGAACAAAAATCTTTCCACAGTGAGAGCAAGTGtgaggtttctctccagtgtgaatccacCGGTAAACTTTCAGGTTTTCCTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00019110 True 680 lncRNA 0.48 2 1007600 1008359

Neighbor


gene id symbol gene type direction distance location
XLOC_008890 si:dkey-7i4.21 coding downstream 4047 722475 ~ 1003553 (-)
XLOC_008902 NA coding downstream 14013 986144 ~ 993587 (-)
XLOC_008901 alox5b.1 coding downstream 54709 942531 ~ 952891 (-)
XLOC_008900 si:dkey-77f5.14 coding downstream 83619 920298 ~ 923981 (-)
XLOC_008896 NA coding downstream 98563 869961 ~ 909037 (-)
XLOC_008904 znf1010 coding upstream 9078 1017437 ~ 1022436 (-)
XLOC_008905 si:dkey-77f5.4 coding upstream 16949 1025308 ~ 1031511 (-)
XLOC_008906 si:dkey-77f5.3 coding upstream 24884 1033243 ~ 1038193 (-)
XLOC_008907 aadac coding upstream 37015 1045374 ~ 1066269 (-)
XLOC_008908 NA coding upstream 132086 1140445 ~ 1143069 (-)
XLOC_008898 NA non-coding downstream 99293 877204 ~ 908307 (-)
XLOC_008899 NA non-coding downstream 106721 899089 ~ 900879 (-)
XLOC_008897 NA non-coding downstream 131615 875328 ~ 875985 (-)
XLOC_008910 LO017713.1 non-coding upstream 313431 1321790 ~ 1321906 (-)
XLOC_008927 AL954387.2 non-coding upstream 1257610 2265969 ~ 2266083 (-)
XLOC_008928 NA non-coding upstream 1315307 2323666 ~ 2328284 (-)
XLOC_008932 NA non-coding upstream 1590445 2598804 ~ 2611170 (-)

Expression



Co-expression Network