XLOC_008906 (si:dkey-77f5.3)


Basic Information

Item Value
gene id XLOC_008906
gene name si:dkey-77f5.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 1033243 ~ 1038193 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017592
ATTCCTCACAGAATCCGATTTCCCCAGTGGCATCATGACCTCTGTGTAGATAAATAGCATCCATCCGCACGGACGGCCAAGACATTTCAAGATGACCAAAGTCACCAAGCTTCATTCCGAAGACATCAGGGCCATGAGGTCTGCGGGGAAGTCCACTCAGGAAATAAATCGCTATCTGAAGTCTGTCGGCGTAAACACCACGCTCAGCACCATCAGAAGACATTACAGAGAACGCATAATTCACAAACGCAACCCTCGCAAAATGAAGCAGGACATTGTTGCAGCCATAGACCAAATGATGAGCCAAAACCAAAAAACAACGGTAAGCTCGGTGAAAAAACATATCTGGCGTGACAATGGAGTGAGCGTCAGTGAGCGAAGCATCCGCAGAATCAAGCAAAAACTTGGTTGGAGATACAAGAAAAACCTACTTCGTCCAACGATCGCAGACACGGATAAAGAAGCACGTCTCCAACTAGCTCAGAAATGGATCGACGAAAAGGAAATGTTTCACGACGTCATTTTCTCAGATGAAATTACGCTGACTTTGGATCACTTTTCCTCCGTTTGTAAAACAGAAAGACGAGAGTTCGAGCCCAAGAGGAAGCGTTGCGTGAAAGTTCATGTCTGGGCAGCCATTTCCAGACTCGGACCAGGACCTATCGTCATCTTTGACAGGATATTGGACAGGACTTTCTTTGAAGACACGATCATAAGAGAAACCGCAGCACCGTACATCAGGGAAAACTTTGGTGTTCATCACCGATTTATCCAGGATAACGACCCCAAGCACACGGCTGCAGGAAAGGTGATCGCCGCGGAGGACATTAACTGGGTGAAGACCCCAGCAGAGTCCCCTGATCTAAACCCGATTGAGATGGTGTGGCATGAGCTGAAGGAGTACCTCCGGATAGAAGCTCAACCGACCATCAAGACTGAGTTAACGGCTGCCATTCACAAGTTCTGGTTTGAGGAACTGACTGAAGCCAAATGCAACAAGTACATTAATCGGCTGCTTGAGGTTCTTCCAGCCGTGGTCAAGAATCAGGGAGGATACACGGGGATGTAGCTGAAACTGCAGGGTCATGACACAACggaaaaataaagatttacattttttaaataatagtaaacGCTTTGAGatcac
>TCONS_00017593
AGTGTGGTACCTCTTGTAGAGGGATGGATGCGCTAACCTAGTTATTTTTACATGTTCATGCAACAAACAATCCGATTTCCCCAGTGGCATCATGACCTCTGTGTAGATAAATAGCATCCATCCGCACGGACGGCCAAGACATTTCAAGATGACCAAAGTCACCAAGCTTCATTCCGAAGACATCAGGGCCATGAGGTCTGCGGGGAAGTCCACTCAGGAAATAAATCGCTATCTGAAGTCTGTCGGCGTAAACACCACGCTCAGCACCATCAGAAGACATTACAGAGAACGCATAATTCACAAACGCAACCCTCGCAAAATGAAGCAGGACATTGTTGCAGCCATAGACCAAATGATGAGCCAAAACCAAAAAACAACGGTAAGCTCGGTGAAAAAACATATCTGGCGTGACAATGGAGTGAGCGTCAGTGAGCGAAGCATCCGCAGAATCAAGCAAAAACTTGGTTGGAGATACAAGAAAAACCTACTTCGTCCAACGATCGCAGACACGGATAAAGAAGCACGTCTCCAACTAGCTCAGAAATGGATCGACGAAAAGGAAATGTTTCACGACGTCATTTTCTCAGATGAAATTACGCTGACTTTGGATCACTTTTCCTCCGTTTGTAAAACAGAAAGACGAGAGTTCGAGCCCAAGAGGAAGCGTTGCGTGAAAGTTCATGTCTGGGCAGCCATTTCCAGACTCGGACCAGGACCTATCGTCATCTTTGACAGGATATTGGACAGGACTTTCTTTGAAGACACGATCATAAGAGAAACCGCAGCACCGTACATCAGGGAAAACTTTGGTGTTCATCACCGATTTATCCAGGATAACGACCCCAAGCACACGGCTGCAGGAAAGGTGATCGCCGCGGAGGACATTAACTGGGTGAAGACCCCAGCAGAGTCCCCTGATCTAAACCCGATTGAGATGGTGTGGCATGAGCTGAAGGAGTACCTCCGGATAGAAGCTCAACCGACCATCAAGACTGAGTTAACGGCTGCCATTCACAAGTTCTGGTTTGAGGAACTGACTGAAGCCAAATGCAACAAGTACATTAATCGGCTGCTTGAGGTTCTTCCAGCCGTGGTCAAGAATCAGGGAGGATACACGGGGATGTAGCTGAAACTGCAGGGTCATGACACAACggaaaaataaagatttacattttttaaataatagtaaacGCTTTGAGatca

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-5102 No description available

Ensembl:

ensembl_id ENSDARG00000087331

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017592 False 1147 mRNA 0.47 2 1033243 1036878
TCONS_00017593 True 1203 mRNA 0.46 3 1033244 1038193

Neighbor

gene id symbol gene type direction distance location
XLOC_008905 si:dkey-77f5.4 coding downstream 1732 1025308 ~ 1031511 (-)
XLOC_008904 znf1010 coding downstream 10807 1017437 ~ 1022436 (-)
XLOC_008903 NA coding downstream 24884 1007600 ~ 1008359 (-)
XLOC_008902 NA coding downstream 39656 986144 ~ 993587 (-)
XLOC_008901 alox5b.1 coding downstream 80352 942531 ~ 952891 (-)
XLOC_008907 aadac coding upstream 7181 1045374 ~ 1066269 (-)
XLOC_008908 NA coding upstream 102252 1140445 ~ 1143069 (-)
XLOC_008909 lxn coding upstream 141683 1179876 ~ 1198886 (-)
XLOC_008910 LO017713.1 coding upstream 283597 1321790 ~ 1321906 (-)
XLOC_008911 si:dkeyp-97b10.3 coding upstream 414641 1452834 ~ 1485086 (-)
XLOC_008898 NA non-coding downstream 124936 877204 ~ 908307 (-)
XLOC_008899 NA non-coding downstream 132364 899089 ~ 900879 (-)
XLOC_008897 NA non-coding downstream 157258 875328 ~ 875985 (-)
XLOC_008927 AL954387.2 non-coding upstream 1227776 2265969 ~ 2266083 (-)
XLOC_008928 NA non-coding upstream 1285473 2323666 ~ 2328284 (-)
XLOC_008932 NA non-coding upstream 1560611 2598804 ~ 2611170 (-)

Expression


Co-expression Network