XLOC_008951


Basic Information

Item Value
gene id XLOC_008951
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 3115337 ~ 3116262 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019115
GTACCAACAATGAGGAGTTTGGATACGGTCCCCACAAACAACTGCTCCATCAGCCAGTTCAAGCACACCGTCTACCCCATCGCCTACCTGTTCATCTTCTTCCTCGGGCTGGTCGGCAACATCACCTCGCTCGTCTTCTTCGTTGCTTCTTCAGTCCGAAAAAAGGTGTCTTTAACTCCGGTGAACATCCTCATGCTCAATCTCCTGCTGTCGGATCTGATGCTGGTGTGCTCGCTGCCTTTCCGGGCCTCCTACTTCCTCATGGACTCCAATTGGGTTTTTGGAGATGTAACCTGCCGGATCATGTCTTACGTCTTCTACATTAATATGTACGGAAGTGTCTACTTTCTGACCGTACTTAGTATGGTTCGGTTCGTGGCCATTGTCAAGCCGTTCGCGTATGTACGCTGGCAAAACCCACGACGGGCCTGGATCATCTGCGTTGTTATTTGGATGATCGTTTCTCTGGCCTCCATCCCGCTTCTGAAAGCAGGAACGCATGAGGAGAATGAAAAAACCAGATGTCTGGATTTGGGACACTCCAATTTGGAAACTATTATCATTTTAAACCGTGGTGTGCTGTTTTTGGGATTTGTCGTGCCTTTCGCGATCATCTCTGTGTGTTATATCTTTGCGGCTGTGTATTTGATAAAGCTCAAGAAGAGGAACCAAAGATCTCAGTTCAACCAGAAAAAGTCCTGCTCTCTCGTCATCATAGTTTTACTGATTTTCCTGGCCTGCTTCATGCCTTATCATGTCGTCCGAACTCTATTTTTGGAGGCTGAGAGGGATATTAAAATCAACGGTTATGGCGATTCTTGCCTTTACATCGAAACTTTAAGAAAAGCGGCAGTCGTCACACACGTTCTGGCGTCTGGAAACAGTGTCTGGATCCGCTGCTGTTCATTTTTGTTGGGGAAAACTTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019115 True 926 lncRNA 0.47 1 3115337 3116262

Neighbor

gene id symbol gene type direction distance location
XLOC_008950 slitrk5a coding downstream 19187 3089212 ~ 3096150 (-)
XLOC_008949 fndc3a coding downstream 36737 2987593 ~ 3078600 (-)
XLOC_008948 mlnr coding downstream 129738 2976120 ~ 2985599 (-)
XLOC_008947 zgc:153184 coding downstream 141969 2931882 ~ 2973368 (-)
XLOC_008946 CABZ01086029.1 coding downstream 184316 2918257 ~ 2931021 (-)
XLOC_008952 NA coding upstream 44176 3160438 ~ 3162459 (-)
XLOC_008953 stoml3a coding upstream 130061 3246323 ~ 3252727 (-)
XLOC_008954 slc25a15a coding upstream 138792 3255054 ~ 3282220 (-)
XLOC_008955 cog6 coding upstream 338267 3454529 ~ 3534705 (-)
XLOC_008956 lpar6a coding upstream 539950 3656212 ~ 3736773 (-)
XLOC_008942 NA non-coding downstream 299195 2813516 ~ 2816142 (-)
XLOC_008940 CABZ01086049.1 non-coding downstream 378839 2736383 ~ 2736498 (-)
XLOC_008933 NA non-coding downstream 489409 2618279 ~ 2625928 (-)
XLOC_008932 NA non-coding downstream 504167 2598804 ~ 2611170 (-)
XLOC_008957 NA non-coding upstream 638304 3754566 ~ 3760957 (-)
XLOC_008970 NA non-coding upstream 1047316 4163578 ~ 4174873 (-)
XLOC_008973 CU467614.1 non-coding upstream 1248896 4365158 ~ 4365272 (-)
XLOC_008997 FO704791.1 non-coding upstream 2266800 5383062 ~ 5383180 (-)

Expression


Co-expression Network