XLOC_008957



Basic Information


Item Value
gene id XLOC_008957
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 3754566 ~ 3760957 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00019117
CGCAAACAAACAGAAACGCTGCTGTTGAGGTCGAAGGCTTACAATAACAAAACACTCTTGCTCAATATCGAGGCCTTCTCTTCTGTCTCTGGCTCAGAGAACGAGTCAAACACAGCTGTCAAGTTCCTGCTTGCTAGAATGAGCTTccggtgagaaaaaaaaaagcaaaagcatgCCTCAACATCTCCAAGACTTTCTGGAAACCACAAGACGCAGGTTTGACAAAAAAATCAGACTTGCGCAACAACAAGAGATACACGAGGTTCAACTCAACAGTCAGGAGATAAACCAAATCTAGCAGGTTTATTTGatgaaataaACTCacacaagtttgg

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00019117 True 335 lncRNA 0.42 2 3754566 3760957

Neighbor


gene id symbol gene type direction distance location
XLOC_008956 lpar6a coding downstream 17793 3656212 ~ 3736773 (-)
XLOC_008955 cog6 coding downstream 219861 3454529 ~ 3534705 (-)
XLOC_008954 slc25a15a coding downstream 472346 3255054 ~ 3282220 (-)
XLOC_008953 stoml3a coding downstream 501839 3246323 ~ 3252727 (-)
XLOC_008952 NA coding downstream 592107 3160438 ~ 3162459 (-)
XLOC_008958 mindy4b coding upstream 165138 3926095 ~ 3940671 (-)
XLOC_008959 clrn1 coding upstream 186739 3947696 ~ 3956906 (-)
XLOC_008960 gpr171 coding upstream 196919 3957876 ~ 3963649 (-)
XLOC_008961 si:ch73-309g22.1 coding upstream 209840 3970797 ~ 3976035 (-)
XLOC_008962 CR626884.4 coding upstream 248615 4009572 ~ 4011013 (-)
XLOC_008951 NA non-coding downstream 638304 3115337 ~ 3116262 (-)
XLOC_008946 CABZ01086029.1 non-coding downstream 823545 2918257 ~ 2931021 (-)
XLOC_008942 NA non-coding downstream 938424 2813516 ~ 2816142 (-)
XLOC_008940 CABZ01086049.1 non-coding downstream 1018068 2736383 ~ 2736498 (-)
XLOC_008970 NA non-coding upstream 402621 4163578 ~ 4174873 (-)
XLOC_008973 CU467614.1 non-coding upstream 604201 4365158 ~ 4365272 (-)
XLOC_008997 FO704791.1 non-coding upstream 1622105 5383062 ~ 5383180 (-)
XLOC_009008 NA non-coding upstream 2137453 5898410 ~ 5901982 (-)
XLOC_009014 NA non-coding upstream 3207424 6968381 ~ 6976921 (-)

Expression



Co-expression Network