XLOC_008967 (si:dkey-83h2.3)


Basic Information

Item Value
gene id XLOC_008967
gene name si:dkey-83h2.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 4085623 ~ 4094888 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017687
CAGATTTATTTGTACACCATGACTGTTTTGGATTTTAGCCTTGTCAGCTGCTTGTGTGTGTCACATAAATGTGGGGAGGAAACACACAGCAGTATTTAAGCAGACACGGTTCCTCATCTTGGAATATTCAATCACTGCTGAAGAGTCTTCAGAGCATCACAGACAACACTTGCTATCTCTGACCACATATAATCCACTATTTTCCACTCTTCTTGAAAAGGATCTGCGCCGCAGAGATGTATATCAGCTCCAGGTGTGTGGGATTGACTCTGATCCCTACAGCGATCATCTCCATGCTTGCAAACTTGCTGCTGTTGTTTCCTGACATGAAGTATCGGTATCTGGCAAAGGGTCATGTGACTGCAGAGGCCTTGTGGTGTTCTGGCATCTGGGCATCTGGATTTCTGgtGCTTGTAGCTGCTCGAGGTTTTACAACACACTACGAAAAGACAGGATGCTGTTATTTTGCTGCCGAGGTTTTGCGTAAAATGGGCTACACATGTTTGGCTATTCTGGCTGCTGGCTTGTGCTTTTGGGTCAGCGGGACTGGTTTGGCACTGGGACCTTTATGTTTACATAACGGAACTCAAGGCCTAAAGTGGGAAAGACCATTAAAGCTAATCAAAACTGGACAGACGCTGTATCTGTATGAGCCAGAGCGATGGGCATCTGCCTGTGTGGAGCCACGAGGAGTCGTGATCTGGAATCTGCTGCTTTTCTCTGTTCTCATGGTCGCCAGTGGCCTTCAGCTCATCTCCTGTGTCCTGCATCTCTTCATCGCCTTTCTGGAGTTCATGTGTGGACCACACTTCTGCAAGAACAAGgtTGTTCCAGCTTGAAATGAAGTAATTGTCATCTGCATGTGAGAATGATGTTGTTCGGGTTAAACAGTCAACTATGACTGATTACTTTATTTTAACCAAAGAGGAAACATAAATGAGAAGTGTGTTAGGAGAGTCACTTCATGTCCTCGAATCTGGGGTTCCTGTGGCTCAGCTGGCTGATAATGATGGCAACACTCTACGTTTGAATCCCAGGGAACACTTGAACATCAGATTAAGCACTGTAAACAACAATGTGCCAAATGCACAAATAGAAATAagctgttttaaatatatttcaatgtGATATTTTATCCTTATGCactttaatatttatgtataagaatgtgtcatttaaattgatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataacgtctGTGTgtcaaaatattgtttagttaATACTAATATGCTGTTTGTTAATGAAATgctgaatatttaacaatatttatcaAGATTAAAATCATGTATAAACAcatcattttgtaaataaatgtacagtagggatgggaagattcatAGATATGTATCGAttcgcggtcatgcgcgtgcacgatgcgagtgcatcggttgagcagcagaggatgaatgaaattttggaagcaaatcgagatgcatcgttttttgcgagatgcatcgatttttccgagatacagcttatatttttaatatagaatgtattttttatttattaacaagtgttgtcaacctgtttttggcgcataatttaatcgacctacataaagtaagccttagcaacggatttgcggatgtgtacacttacactacaactcagtgtatcaggtgtgcggatgaagctagtggagcgccctcagaaagcgtgagaagcaaaacaaacattttattcctcactgagttttaaatctaaagtatggcaacattatggatttaaggatggacgacatgacaggacagatgcaatttgcaaaatgtgccgcgcatctttaaaatacgcgggcagtacgactaatctgaaatctcacttgaagtggcgccacggtgttgttgtgaaagcatcttccagtgttcctgcatccccggctttcgcactgcttcaaccagctccaaaagtggtgagaaaagcattgcaagtttttttttccgtgcgcaacagttttgtgcgctctacgccaataacgaatgctattgcattgttcatctgcaaagatattcagcctagtgtcacggagaacgaaggttttaaacacctcctcctgttaatttttatttaattataataataataatattaataataataatgataaatataatgggtgtcacggtggcacagtgggtagtttgaccacctcacagcaagaagattgctggtttgttatatttttattagcctgttgtttacagtgacagtgatgtttcaaagcagcataacactgctagttcacgaccttaagttttgaataatcagtggcaaaatatctttgtaaaacttgttttcatagttgaaaagttaaatcccaattcttgttgtgcaatgctcaacctttatgttgaaagagtgcaaatatatatatatttttaatatatattgcacttatacattctgtttatcttgaaaatacttaaataatatgtgctatatgttctaaaatggccctctactgtaaactgacactctggctctgagagaagagccagtttgtaaaaaaagtcttggttttgcttggtttataaataatcaaactcattcaatggcacagcatcctctttcacatcatctcataaacttgatctaattagttagtgctgaaatatcgcatcgtatcgtgatatgggtgtgaatcgtatcgtgttgcatcgcaatatgtcacaaatgtatcgctaatatatcggatcgtattctttgtatcgagatgcgtatcggatcggcattatagcttagatgcccaaccctaatgtaCAGTACTATTTActgaattgcatttatttttatttaattatatacaagCAACACACTGTTGcactttattcattaattcattcaatttcttttcagcttagtccctttattaatctggggtcgcc

Function

symbol description
si:dkey-83h2.3 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100378

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017687 True 2952 mRNA 0.38 6 4085623 4094888

Neighbor

gene id symbol gene type direction distance location
XLOC_008966 CR626884.2 coding downstream 18465 4062000 ~ 4067158 (-)
XLOC_008965 CR626884.5 coding downstream 32474 4049222 ~ 4053149 (-)
XLOC_008964 P2RY14 coding downstream 47997 4036709 ~ 4037626 (-)
XLOC_008963 CR626884.6 coding downstream 58256 4018362 ~ 4027367 (-)
XLOC_008962 CR626884.4 coding downstream 74610 4009572 ~ 4011013 (-)
XLOC_008968 rnf168 coding upstream 6366 4101254 ~ 4124099 (-)
XLOC_008969 ANO7 coding upstream 33672 4128560 ~ 4152582 (-)
XLOC_008970 NA coding upstream 68690 4163578 ~ 4174873 (-)
XLOC_008971 ece2b coding upstream 77400 4172288 ~ 4314097 (-)
XLOC_008972 atp1b3b coding upstream 258273 4353161 ~ 4415917 (-)
XLOC_008957 NA non-coding downstream 324666 3754566 ~ 3760957 (-)
XLOC_008952 NA non-coding downstream 923164 3160438 ~ 3162459 (-)
XLOC_008951 NA non-coding downstream 969361 3115337 ~ 3116262 (-)
XLOC_008946 CABZ01086029.1 non-coding downstream 1154602 2918257 ~ 2931021 (-)
XLOC_008942 NA non-coding downstream 1269481 2813516 ~ 2816142 (-)
XLOC_008973 CU467614.1 non-coding upstream 270270 4365158 ~ 4365272 (-)
XLOC_008997 FO704791.1 non-coding upstream 1288174 5383062 ~ 5383180 (-)
XLOC_009008 NA non-coding upstream 1803522 5898410 ~ 5901982 (-)
XLOC_009014 NA non-coding upstream 2873493 6968381 ~ 6976921 (-)

Expression


Co-expression Network