XLOC_008984 (or126-2)


Basic Information

Item Value
gene id XLOC_008984
gene name or126-2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 5189408 ~ 5191672 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017719
GTAAGATTTCAATACAACAGTTTTGTAATTGAAAGAGTTTTGAGGGCTTTACATTTGCTTTGCTGGTGATGTTTTACACACTGCGATAAATCAAATTAATATCATGTCCAATTTTCTCATCATTTCCTATAACAAAACATACACAGTAACTGCATTTCTTTCAAGATGCAGCCAGCACTGAAGAATGAGTCCAGCGTCTTAATATTTACACTCTCTGCTCTGAATGAAACAACAGAGAACAGATATGTCTTGTTTTCTTTAACTGCACTGTACTATCCTTTGATTGTCTTTTGTAATGTAACCGTGATTTTCACTATAATCTCACATAAGAAGCTCCATGAGCCaatgtatgtgtttatatgtagtttgtgtgtaaatggacTTTTTGGCACTGTTGGCTTCTACCCTAAATTCTTGTATGATTTATTATCCCAAGATCAAGTGATTTCCTATGTTGGGTGTCTGATTCAGATCTTTGTCATTTATTCATCTCTTCTGTGTGATTTTTCAACACTAACAGTCATGGCGTATGACAGGTATGTGGCAATATGTAGACCACTGGAGTATCATTCTGTAATGACTGCTCGCATGGTTTTCAAATGCATCCTTTTTTGTTGGCTTCCTCCCATGTCTTGCTTGTGCCTTCTAGTTACATTAACATCAAGATTAACCTTATGTGGCTCTAGTATTGAAAAGCTATATTGTGAAAATTGGTCAGTTGTTAAACTGTCCTGTTTTTCCACGACGGTAAATAATGTGATTGGGtttgtcatcattattatttattttacacatgCAGTATTGGTGTTTTGCTCATACATGTACTTAATCAGAAAATGTAGGAAGTCGATAGAGGGCAGGCACAAATTCATACAAACGTGTGTGCCGCATCTGCTTTCATTAATCAATGTGACAACTGCTTTTTTGTTTGATGTACTGTTCAGTCGTTATGGCTCGAAGAGTGTGCCTCAAAGTCTGCGTAATTTTATGGCGCTTGAATTTTTACTCCTACCACCCATTTTAAATCCTCTCATTTATGGGTTAAAACTGACAGCAGTGCGCCAGGAAGTTATGAGACTGTTTTCCAAGAGACAAATGTGAAAGGTTTTTAGAAAGATTGTGACGATGGGgaaaataataattgtgttggaataacccagcatgttttagagtgtagaaaatgttttaattatatctTACtgaatattttagtagatatttgaTCAGGGCACGGGATCTTATgctgaaaatgagctctaaaatatatttttgatatataaAGACGATTCACATAATGGGTAGTAATCTAATTTATGAGTGGATGTACAAGGAAATAGTTTATCAAGTCAAAGAATCCCATGAGTTATGTGTTTTACCATGATTGAAATACTAATAAAAGTCTAAAGGAATCATATTTATGGATGTTTATAAGATTTATATCGGTAACAGTTTAcagtaaggttcattagttaatgtatttactaacatgaactaatcatgaacaacacttgtacagcatttaatcataattgaacatttacaaatgcattattaacattcatgggttgcagctggaagggcatccgctgcgtaaaaacttgctggataagttggcggttcattccgctgtggcgaccccggattaattaagggactaagccgacaagaaaatgaatgaataattaacattcaagtccgtgcttgttaacattagttaatgaaccatgagttaacatgaactaacaatgaacaactgtattttcattaactaacctttactaacatgaataaatactgtagtaaatgtattgttcatcgtttgttcatgttagtaaatgcattacttaatgaaccttattgtaaagtgtgacctttataTCATGGTAAATGTTTAAGTGAATATTACATCGTCTAAATATCCTGTTTTCTGCATCTTAGAATGactggaataaatgtgtaaaGATATATCATGGCAGTTATTcttttagattaaataaattaatacaataatatacaagAGATTTTTATGTTACAATAATTAGGTATGAAATGAGGTTGAGGGCCTTAGACAAAAAAGTCTGTACCACACAGTTGTATGTACACAATGGTATTTTGGATCAACCAAATATTCTGAATGTTTAtgaatgctctctctctctctctctctctctctctctcttttttttttttgtgattgtgtAAAATACAGCTctctaatataattaatattttaataaaaggcTGTTGAGTTATTTTATTGTCTGT

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0050896 response to stimulus biological_process
GO:0007608 sensory perception of smell biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070806-100 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in plasma membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000105722

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017719 True 2265 mRNA 0.33 1 5189408 5191672

Neighbor

gene id symbol gene type direction distance location
XLOC_008983 or126-3 coding downstream 5222 5182854 ~ 5184186 (-)
XLOC_008982 or126-4 coding downstream 10509 5175593 ~ 5178899 (-)
XLOC_008981 or126-5 coding downstream 17238 5167690 ~ 5172170 (-)
XLOC_008980 or126-7 coding downstream 24395 5162274 ~ 5165013 (-)
XLOC_008979 or128-10 coding downstream 31836 5155137 ~ 5157572 (-)
XLOC_008985 or128-9 coding upstream 5043 5196715 ~ 5198191 (-)
XLOC_008986 or128-8 coding upstream 10382 5202054 ~ 5203371 (-)
XLOC_008987 or128-7 coding upstream 13866 5205538 ~ 5207805 (-)
XLOC_008988 or128-6 coding upstream 18796 5210468 ~ 5212930 (-)
XLOC_008989 or128-5 coding upstream 24135 5215807 ~ 5217706 (-)
XLOC_008973 CU467614.1 non-coding downstream 824136 4365158 ~ 4365272 (-)
XLOC_008970 NA non-coding downstream 1014535 4163578 ~ 4174873 (-)
XLOC_008957 NA non-coding downstream 1428451 3754566 ~ 3760957 (-)
XLOC_008952 NA non-coding downstream 2026949 3160438 ~ 3162459 (-)
XLOC_008951 NA non-coding downstream 2073146 3115337 ~ 3116262 (-)
XLOC_008997 FO704791.1 non-coding upstream 191390 5383062 ~ 5383180 (-)
XLOC_009008 NA non-coding upstream 706738 5898410 ~ 5901982 (-)
XLOC_009014 NA non-coding upstream 1776709 6968381 ~ 6976921 (-)
XLOC_009015 CR396585.2 non-coding upstream 1817150 7008822 ~ 7008938 (-)
XLOC_009016 CR396585.1 non-coding upstream 1840425 7032097 ~ 7034722 (-)

Expression


Co-expression Network