XLOC_008992 (or128-2)


Basic Information

Item Value
gene id XLOC_008992
gene name or128-2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 5237596 ~ 5239536 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017728
TTTTTCCTCAcatattaaataaagaaacaatggTCAACAATGTTCATGTGTCACAGAAGGTCACTAATGGGAAACCTTGGTTCCTAAAGCAAAATGGAAAATAATACCAGTTTTAACTTCATGTTGTTTGAAAATCTAGGATACATAAGATATGCTCTCTTCATTTTGGgttttgttctgtattttgcTATAATACTCTTTAATGTCCTTATAATGCTTGCAGTGTTTCGGGAAAGGACATTACACCAGCCTATGTACATTCTGATTTCATGCTTGTCTATGAACTCTTTATTTGGTACAGCTGGCTTTTTCCCAAGAGTTCTGTCAGACTTGCTGTCTGAAACACACTCAATCTCTCGTGAAGCATGCTTCTTCCAGTCTTTTGTCATTTTCACATATGCAGCAAATGAGTTCACAATATTAATGTTAATGGCGTTTGACAGATTTGCTGCAATTTGTAAACCTTTACGTTACCACAGCATAGTTAGACCAAGGTTTCTTGCTTGTTTAATAGTTATAAACCTGACTTTTCCAATGATTTTGCTTGGTGTTTCTGCACTTTTAACTACCAAACTAAAAATGTGTGGTAACAAACTATTTAAGGTGTACTGCCATAGCTATGAAGTAGTCAAGCTTTCTTGTGACAACATCGCAATCAATAATGCTTTTGGCttgtttatagtaataataactaCCATCATCCCAATAAGTTCAATACTATTTTCCTATGTAAAAATTCTTATCATTTGTCAGAGAAGCTCAGCACAGTTAAAAGGCAAAGCATATCAAACCTGTATTCCACACATAGTGGTCCTGTTGAATTTCACAATTGCTGTAACATGTGATGTCACTTTGAGTCGGGTTGCGAATTTGCAAATTCCTGTAGGTCTGTCCGTTTTTCTTTCACTCGAGTTTCTTATTATACCACCTGTACTCAACCcccttatttatgcttttaaccTGCCTGATATTCGCAAAAAAATGGTCAGCCTTATAAAACCATTGAGATAGTTATTTAGTTTGTTTGGTCTTTTCTGTTCAGATGTAGTACAAATTGCACACTCTCATTAAAGTTGTCTTTTATGTTACAATAATGTCAAGTTACTGTATGTCTTTATGTAATAAAACAGCATGCATgctaaattgaaaacaaatctgttgtgaataaaaaaaaaaatatatatatatatatatatatatatatatatatatatatatatatatattgttatatactCTTTATTAGAACTTAAGATTCTACACTTTTGCACATCACTAATCCAACTCAATAACTAAAACTAACTATTACCTTACTATTAAACAGCAGAAAATgtgtagtttattgagctaagtCTTGGTTAATAGCAATAATTTGACCTTGAAATAAAGTGTAAGAATTActttatattagtattattatttttgttgctattattattattttaaatctcaCAAAATAGTGGCATTTGAAATCTAGATTGAAATTCAGTCCCTTCATTGAATGTACAGTAGCAATTTGTTATATGAGCTTTACACACAATATTGTGAAGTTTCCCATATCTGTGATGTTAATGTGTCTACCTGAACTTTAAAAGGGAACAAATCATGTGTATGAACCCTTGCCAATAAAAATTCTTTGCTGACTTTTCTTTCAGGCTGATGGTTTTTAGCTTTTTAAGTTT
>TCONS_00017729
ATGGAAAATAATACCAGTTTTAACTTCATGTTGTTTGAAAATCTAGGATACATAAGATATGCTCTCTTCATTTTGGgttttgttctgtattttgcTATAATACTCTTTAATGTCCTTATAATGCTTGCAGTGTTTCGGGAAAGGACATTACACCAGCCTATGTACATTCTGATTTCATGCTTGTCTATGAACTCTTTATTTGGTACAGCTGGCTTTTTCCCAAGAGTTCTGTCAGACTTGCTGTCTGAAACACACTCAATCTCTCGTGAAGCATGCTTCTTCCAGTCTTTTGTCATTTTCACATATGCAGCAAATGAGTTCACAATATTAATGTTAATGGCGTTTGACAGATTTGCTGCAATTTGTAAACCTTTACGTTACCACAGCATAGTTAGACCAAGGTTTCTTGCTTGTTTAATAGTTATAAACCTGACTTTTCCAATGATTTTGCTTGGTGTTTCTGCACTTTTAACTACCAAACTAAAAATGTGTGGTAACAAACTATTTAAGGTGTACTGCCATAGCTATGAAGTAGTCAAGCTTTCTTGTGACAACATCGCAATCAATAATGCTTTTGGCttgtttatagtaataataactaCCATCATCCCAATAAGTTCAATACTATTTTCCTATGTAAAAATTCTTATCATTTGTCAGAGAAGCTCAGCACAGTTAAAAGGCAAAGCATATCAAACCTGTATTCCACACATAGTGGTCCTGTTGAATTTCACAATTGCTGTAACATGTGATGTCACTTTGAGTCGGGTTGCGAATTTGCAAATTCCTGTAGGTCTGTCCGTTTTTCTTTCACTCGAGTTTCTTATTATACCACCTGTACTCAACCcccttatttatgcttttaaccTGCCTGATATTCGCAAAAAAATGGTCAGCCTTATAAAACCATTGAGATAG

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-070806-107 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000058765

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017728 False 1682 mRNA 0.32 2 5237596 5239536
TCONS_00017729 True 918 mRNA 0.36 1 5238267 5239184

Neighbor

gene id symbol gene type direction distance location
XLOC_008991 or128-3 coding downstream 7173 5228580 ~ 5230423 (-)
XLOC_008990 or128-4 coding downstream 14672 5220992 ~ 5222924 (-)
XLOC_008989 or128-5 coding downstream 19890 5215807 ~ 5217706 (-)
XLOC_008988 or128-6 coding downstream 24666 5210468 ~ 5212930 (-)
XLOC_008987 or128-7 coding downstream 29791 5205538 ~ 5207805 (-)
XLOC_008993 or128-1 coding upstream 3304 5242840 ~ 5245752 (-)
XLOC_008994 or126-1 coding upstream 11418 5250954 ~ 5252673 (-)
XLOC_008995 or127-1 coding upstream 22113 5261649 ~ 5262942 (-)
XLOC_008996 or120-1 coding upstream 67592 5307128 ~ 5309213 (-)
XLOC_008997 FO704791.1 coding upstream 143526 5383062 ~ 5383180 (-)
XLOC_008973 CU467614.1 non-coding downstream 872324 4365158 ~ 4365272 (-)
XLOC_008970 NA non-coding downstream 1062723 4163578 ~ 4174873 (-)
XLOC_008957 NA non-coding downstream 1476639 3754566 ~ 3760957 (-)
XLOC_008952 NA non-coding downstream 2075137 3160438 ~ 3162459 (-)
XLOC_008951 NA non-coding downstream 2121334 3115337 ~ 3116262 (-)
XLOC_009008 NA non-coding upstream 658874 5898410 ~ 5901982 (-)
XLOC_009014 NA non-coding upstream 1728845 6968381 ~ 6976921 (-)
XLOC_009015 CR396585.2 non-coding upstream 1769286 7008822 ~ 7008938 (-)
XLOC_009016 CR396585.1 non-coding upstream 1792561 7032097 ~ 7034722 (-)

Expression


Co-expression Network