CI01000034_01305634_01306636


Basic Information

Item Value
gene id CI01000034_01305634_01306636
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 1305634 ~ 1306844 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_01305634_01306636.mRNA
ATGGTGAGGCCATTCCTTGGATTCGATAATGAAGAGATTGAAAAGGAAAGAGAAGAGGATGGAGTCTCAGAAGTGGAGAGGACAGCAGCAATGTTTAGATCTCCACCAAGAGAGTTACGGGTTCTGTTAGTAGGCTGGCGTGGAGCAGGTAAGAGCTCTGCAGGTAATCTTCTACTGGGCTGTCGTGTGTTTGAATCGGGACGCCCCACTGAGGTATCTGTCCGTCGTCAAGCATTGGTTGCTGGTCGGCGCCTCACAGTTGTTGACACACCAGGTTGGGATTGGTTCTCCGTCCAGCGCACACCCAGCAACATTCGAAAAGAAATCAAACAAGGGGCAGGGCTTCTCCATCCTGGCCCACATGCGCTCTTACTGGTTATCCCTGTGGTCTCGACCCTCACTCCCAAAAAGAGGCAGGCCCTCAAGAGCCATTTGGAAATGTTTGGCGAGGAGGCGTGTCTTCACACACTGGTGCTGTTTTCATGTGGCGATTGGCTGTATGGCACATCAATCGAGGAGCACATCCAGCGGGATGGAGGTGAGCTGCTGAAATTGATGCAGCATTGCTGGAACTGTTATCATGTGCTTGACTGTACCAAAGCTAACAAGGATAGGACGCAGGTGACTGAACTATTGCGGAAAATAGAGGAAATGGTGGCAGAGAATGGACAGACACCTTTCTTACCTGTCAAATTAAATCAAGAACTAGACGAGGAGGAAACGAGTGGAAGATGCATTCTACAGTGAAATATAAGGCAACATAAAGTGCATAAACTTCCATTCACACTGTTTGTATGTCATCTTCATAGAATGCAAACTGAATTTGAACTAGACATTCTACTGCTTTTTAACTTCATTGTCAGTCTGTTGACAGTATACATCAGACTTACAACCTACATTTCTGGCTTCTTGAGCAATGTTAAGATTTAGTCACAAGATTTCCATGAAGTTTTAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_01305634_01306636.mRNA True 955 mRNA 0.46 3 1305634 1306844

Neighbor

gene id symbol gene type direction distance location
CI01000034_01210160_01223724 NA coding upstream 81765 1210160 ~ 1223869 (+)
CI01000034_01139725_01146104 BAIAP2L2A coding upstream 159310 1139725 ~ 1146324 (+)
CI01000034_01124686_01125224 NA coding upstream 179437 1124686 ~ 1126197 (+)
CI01000034_00951238_00955839 NA coding upstream 349547 950467 ~ 956087 (+)
CI01000034_00943362_00945523 NA coding upstream 360003 943362 ~ 945631 (+)
CI01000034_01383935_01395565 NA coding downstream 76747 1383591 ~ 1396448 (+)
CI01000034_01632580_01633233 NA coding downstream 325158 1632002 ~ 1633525 (+)
CI01000034_01637348_01637904 NA coding downstream 329767 1636611 ~ 1638009 (+)
CI01000034_01657515_01658817 NA coding downstream 350366 1657210 ~ 1659106 (+)
CI01000034_01729413_01730790 EVE1 coding downstream 422569 1729413 ~ 1731179 (+)
G169435 NA non-coding upstream 3567 1294169 ~ 1302067 (+)
G169434 NA non-coding upstream 9630 1295591 ~ 1296004 (+)
G169422 NA non-coding upstream 57262 1248147 ~ 1248372 (+)
G169417 NA non-coding upstream 72545 1232887 ~ 1233089 (+)
G169391 NA non-coding upstream 173166 1127749 ~ 1132468 (+)
G169456 NA non-coding downstream 46314 1353158 ~ 1353446 (+)
G169458 NA non-coding downstream 50149 1356993 ~ 1357240 (+)
G169460 NA non-coding downstream 58361 1365205 ~ 1365584 (+)
G169461 NA non-coding downstream 62292 1369136 ~ 1369364 (+)
G169394 NA other upstream 112074 1150297 ~ 1193560 (+)
G169357 NA other upstream 186615 1053543 ~ 1119019 (+)
G169309 NA other upstream 335713 969261 ~ 969921 (+)
CI01000034_00643011_00645310 RBX1 other upstream 659224 642901 ~ 645310 (+)
G169806 NA other downstream 1011129 2317973 ~ 2337690 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 2127292 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 2818256 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 2887794 4192311 ~ 4200636 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026327 si:dkey-110g7.8 coding NC_007114.7 CM002887.2 24201956 ~ 24205339 (-)