CI01000034_01862099_01867869


Basic Information

Item Value
gene id CI01000034_01862099_01867869
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 1862099 ~ 1867869 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_01862099_01867869.mRNA
AGGTGGGTGTTGGTAAAATATCTCCAACTGGAGCAAGTTGCAAAGACTATGCGATCCACTGTGTTCACGAGTGGAGGACACAGACTGGACGCGAGCCTCAGTAAGAAACCAGCAGGAGCCCATGAGTCCCTGGCCGGCCTGAAGAAGGAGAGCCAGAACATTGCCACCAGCGTGCTGAGCACAATCCACAACAGTGTAAATCAAAAGCATCACCTACACAGTCAAGCAAAGATCAGCCATCAGAGCGTGTTGAGCTGCCCCGACCAATCTCCAGCAGGGAACCTCGAGCAGGAGGAGAACTGCGAGAAGCCGGGGGCCTTGACACTCCTGTCAGCCAAGCAGATGGGGGCCGAAGGTTCCCCGGTCAAGAGCAAATCACTGTTTTGTCAGGCCAAACACAACCACGTAGGGAAGATGGATCCCATGGTATCAAATGGCAGCAATCAACGGAGAGATGGAGGGCAAGTGGGGGCGGTCATGGGGGTCCCCTCACCAGAGAACAGTCCCGATGGAAAGCGTCGGAATGTGAGGAAAGGCTCAGGCCTTGTGGACACACAAACCAGCTGCATTCGACAGATCCTGCTGCTGCAACTGGAATTGATTGAACAGCAGCAGAAGCAACTGCACAACAAGAGCAAAGAGATTGATGACCTCAAAGCTGAAAAAGAGATGCTAATGGCACGAATCGAACGTATGGAGCGGCGGCTGCAGATGGTGAAAAAAGATGGAGCTGAATCCCGTCCTTCTCAGACTCCTCGTCGTAGAGAACCTGAGGCAGAGACCACCGCCTCAGATGATGTCCAGCATTCTGAGGGGCGGGTCCAAACCCCAAAGCAAATGCACTTTGGAAGAGGAGGAAAAAGCCTGAAAAGGAGGTTTCTTTTCCAAGACTCTCGGATGGGTAGGTCACGACGTGGGCAGCCCAGGTCACCACCGCCGCCACAGGAGGGCCCAGATCTGAAGGAGGAACCCCAGGAAGAGATGGGGCTTGAATTGTCTCAATCAGAGGAACTGCCCTACCTGGCTACCACAGAGATGTACCTCTGCCGCTGGCAGCAGCCGCCACCATCACCGTGGCGAGAATCCTCACCTGTACATGAGGACACAGTTGCAGTTCCATCCTGGCGGGAGAGTATCTTAGATCCTTTGGAGCAGAAAGAAGCATCAGACATCCCTGAGTGTCTGGATGATAACGTCTTTCTGAAGAGACATTCAAAGCTTGAACTGGATGAGAAGAGGAGGAAGAGGTGGGATATCCAACGTATTCGGGAGCAGAGAATGTTTCAGCGCCTGCAGCAGAGGATGAACAGGAGGAAGGTCATTCAGGAAAGCGAACCAGAGCTGCTCTCCTTCTATCCAGACCCTGAAGATGTGGAGTCTATTATGGTGACACCCTTTTTGCCAGTGGTGGCTTTTGGAAGACCTCTTCCCAACCTGAAACAGCAATCCGCTTTCCCTTCCTTGAGAGTTAAGATGGCGGACCGGCGGCGACGGAGACGGCGCGCCTCTCAGGACAGCGAGGAGGAGGACGAGTCCGCCTCGGGCTCCGAGAGCGGGAGATCCTCCTCGGCCGGCCGGAAGCCTCGCGGAAGAGATCCCGAGCCGGTCGAATCACCAGTGGAGCGCGTCGCCACCAAAAGAGACGATGAGTCGGAGTGTGAAAGTGAAGATGGTGTTGGTGAAGCAGTGCTATCAGACTATGACAGCGCTGATCTGGAGGAGAATGGATCGCACACAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_01862099_01867869.mRNA True 1740 mRNA 0.55 10 1862099 1867869

Neighbor

gene id symbol gene type direction distance location
CI01000034_01858418_01860499 NA coding upstream 1014 1858418 ~ 1861085 (+)
CI01000034_01811735_01836960 IGF2BP1 coding upstream 25139 1811467 ~ 1836960 (+)
CI01000034_01769963_01776287 UBE2Z coding upstream 85379 1767975 ~ 1776720 (+)
CI01000034_01764505_01767882 ATP5G1, ATP5G3 coding upstream 94177 1764505 ~ 1767922 (+)
CI01000034_01729413_01730790 EVE1 coding upstream 130920 1729413 ~ 1731179 (+)
CI01000034_01872601_01880795 CASC3 coding downstream 4732 1872601 ~ 1880795 (+)
CI01000034_01900645_01947187 RAPGEFL1 coding downstream 32776 1900645 ~ 1947187 (+)
CI01000034_02231423_02231755 NA coding downstream 363434 2231303 ~ 2232124 (+)
CI01000034_02256162_02260170 NA coding downstream 387896 2255765 ~ 2260464 (+)
CI01000034_02275470_02281951 CYB561 coding downstream 406732 2274601 ~ 2282604 (+)
G169611 NA non-coding upstream 31208 1827583 ~ 1830891 (+)
G169477 NA non-coding upstream 170029 1691030 ~ 1692070 (+)
G169482 NA non-coding upstream 184453 1676497 ~ 1677646 (+)
G169578 NA non-coding upstream 242724 1619099 ~ 1619375 (+)
G169620 NA non-coding downstream 26611 1894480 ~ 1910064 (+)
G169606 NA non-coding downstream 82561 1950430 ~ 1952366 (+)
G169616 NA non-coding downstream 84626 1952495 ~ 1952784 (+)
G169612 NA non-coding downstream 85040 1952909 ~ 1953359 (+)
G169636 NA non-coding downstream 115928 1983797 ~ 1984917 (+)
G169340 NA other upstream 551221 1250219 ~ 1310878 (+)
G169394 NA other upstream 668539 1150297 ~ 1193560 (+)
G169357 NA other upstream 743080 1053543 ~ 1119019 (+)
G169309 NA other upstream 892178 969261 ~ 969921 (+)
G169806 NA other downstream 450104 2317973 ~ 2337690 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 1566267 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 2257231 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 2326769 4192311 ~ 4200636 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location