CI01000034_04282490_04284734


Basic Information

Item Value
gene id CI01000034_04282490_04284734
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4282490 ~ 4285536 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_04282490_04284734.mRNA
AGTTGAGACTGGTGCTGCTGGGCTCAGCGGGTGCTGGGAAAAGCACTGCGGTCGATGCCATCCTGGGCGGCCCGACATCTGAGTCCGACTGTACAGGCCCTGAGACACCAGTCACTGCCTGTCAGAAGAGACGCGTGACGCTGGCAGGACGACAGGTGGCTGTCGTGGACACACCTGACTGCCTGTGCATCGAGCGCCCCGCTGAGGACGTCCGCCGCCAGTTCTCACTCTGCGCCACTTTATCGGCCCCGGGGCCCCACGCTTTCCTGCTCTGTGTCCCCGTTCATCGGCCCAGCAACCTGGAGCTCCAGATTTTGGAGACCATCGAGAAGGTGTTTGGTCCTGAAGCGGTTAGTAAACACGCAATGGTGCTCTTCACTCGCATGGACCGCCTGCCCGAGGATGTTTCTCTGGATGAGTATCTCAGCACAGAACGGGCCGACTTACTAGAGCTCGTACAGAAGTGTGGGGATCGACACCACCCGCTGCGGCCGGGAGCGAATGCAGAGGAGAAGGACAACGTGAAGGAGCTGCTAATAAAGTGTGGTCGGGTGGCTTCTGTGGCTCCCGAATATGGTGAGGGGCAGTGCTTTACTGGGGTCGTTTGTGGGGTTGTTCGTCGGGGGGCCCTTAGGAGGGGCCATGGGAGCGACGGTGGGCTCTGTGGCGACGGAGATGGGTAGACGGAAAAAAAAAACCAACTGAGCACTTGAAAATTTGGTAACATCTTATTGTATTTTTCACCATTAACAAAACATTTAAAAAAACAGATCAGTTATTCTTATACATTCCGATGTGAATATACAGTCAAACCAAAATTTATTTAGACACCTTGAACATTTCATTCATTATTACAGTTTATTCACTATAGTTTAAAAAAAATGGTAATAAAATATGACAAGATCTCAGAGTTAAACTGTGTCAGAAAAATTTAATCTTAATTATGTCAGATAACACTTAAGCAAAACATTGTTTAATATAATAACATTGTTTAATAACATAATATGTCACAGTTTACTTTATTTTGCTATCCTCACTTACATAAATAAACTATAGTGTCCTGCACCTACTAAAAAAATATCAAAAATGTCTGAATCATTTTTGGTTTGACTGTATAATCAGCTAATGAAATGCTTTTGCATGATTCTAGTTGAATACAAATTTTTTCCATTACAAAAATTATATTATTAACCAAATGATTTGAGTGAAAAGTTGATTTGAAAAATTAACGTGAAGTTCGGTCTTAGATTTTGCTTTAATGACAGAAGCACTTTACACAAGTTTGACGATCACGCTATCACAAGCTCTGTCACATGATTGCTTGTGTCATTTCTGACCCATAAATAATGCAAAATATTAAATTTTTTCATTAATTTTACCCTTATATCTTTTTTATTTTCAAAATCCTAAAATGTTCAGTTTAGACAGATTTTTAGTCTATATATAAATTATATAAAATAAATTGTGTATCTGTACGATTTTTTA

Function

NR:

description
GTPase, IMAP family member 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_04282490_04284734.mRNA True 1485 mRNA 0.42 3 4282490 4285536

Neighbor

gene id symbol gene type direction distance location
CI01000034_04260286_04274615 NA coding upstream 7088 4260286 ~ 4275402 (+)
CI01000034_04251494_04257594 ANKRD54 coding upstream 24633 4251494 ~ 4257857 (+)
CI01000034_04244137_04250139 FOXRED2 coding upstream 31897 4244137 ~ 4250593 (+)
CI01000034_04229970_04238150 MCM5.S, MCM5, MCM5.L coding upstream 44023 4229970 ~ 4238467 (+)
CI01000034_04222777_04228601 GCAT coding upstream 53745 4222597 ~ 4228745 (+)
CI01000034_04364393_04367046 S1PR5, S1PR5A coding downstream 78778 4364314 ~ 4367204 (+)
CI01000034_04473631_04513799 RFX1, RFX1A coding downstream 188095 4473631 ~ 4514545 (+)
CI01000034_04525428_04534655 NA coding downstream 239465 4525001 ~ 4535684 (+)
CI01000034_04548660_04597274 GRIN2C coding downstream 263051 4548587 ~ 4597396 (+)
CI01000034_04641898_04648112 NA coding downstream 355490 4641026 ~ 4648150 (+)
G170528 NA non-coding upstream 60994 4221283 ~ 4221496 (+)
G170240 NA non-coding upstream 61887 4218753 ~ 4220603 (+)
G170527 NA non-coding upstream 64334 4217889 ~ 4218156 (+)
G170526 NA non-coding upstream 64761 4216212 ~ 4217729 (+)
G170520 NA non-coding upstream 92079 4190047 ~ 4190411 (+)
G170537 NA non-coding downstream 33064 4318600 ~ 4319988 (+)
G170545 NA non-coding downstream 49441 4334977 ~ 4335206 (+)
G170554 NA non-coding downstream 64102 4349638 ~ 4349878 (+)
G170559 NA non-coding downstream 70366 4355902 ~ 4356118 (+)
G170562 NA non-coding downstream 75283 4360819 ~ 4361310 (+)
CI01000034_04192675_04200041 NA other upstream 84289 4192311 ~ 4200636 (+)
CI01000034_04125435_04125780 RPRML other upstream 155679 4125100 ~ 4126825 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other upstream 830641 3432846 ~ 3438839 (+)
G169806 NA other upstream 1944800 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 2551313 1729413 ~ 1731179 (+)

Expression


Co-expression Network