CI01000034_04525428_04534655


Basic Information

Item Value
gene id CI01000034_04525428_04534655
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4525001 ~ 4535684 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_04525428_04534655.mRNA
ACTTAAAAAGTGAGTCCAGCAAGATAAATCCACCTCCTGACTCCTGAGCTTTAGCACAGAGAGAAACTTCTATTAGGGCTACAGCATCTGAGCTATTGCTAGTAAAACCCAAACTAGATGCTGTACACTGAAGTATACGGTTATAAACAAGATTATAAAGTAAAATTTGTAACGATTGCCCAAAGTATTGCATTCTCAGAGTATGGAAATTGCTACCAATATTATGTCTGGACTTCAAAGAATGAGAGTAGAAATGGCTCACAATCATGGAAGCCATCTGTTTAAGAAGAGTTATTTAAAAAGAGAGAGAGAGAAGATGGTTTAGAGGAAGGGAGACGGGAGGGAGGAGGGTTATAAAGAGAGAGAGAGAGAGTTCGAATAAATCCTTACCACATAATGATTACGGCTCACAAGTCCTGCCTCTGAAATGGAGTGCAGAAGGAGCCGGGATTACAACTACAGTAATCTGAGAACCACAACTGCACTCTACAGCCACAGACGAGCACATCAACTCCAACAAAACATCAGGGTTTTTGGAGTAATCCGTGGTGTCTTTTACTGGAATGAGGACTACACTGGAAAAATGAGGCGGAAACAAGTTAACAAGGGCTGTGAAACTGTGTCATCTCAAGCTGCTGCACCCACAGGTTGGATGCTTGTTGAAATTGTGAAGTTTTCTTTTACAAGTGTGGCCAAAACACACAAACCTCTGTGTCCCTTCCCTGTGCAAGAGGTCACTGAAAGTTACTACGTTTTCAACACATGGCAGACTGAGGGGCGGATGGGTGTCAGTCCACAAGCCAGATTACAAAACAAAGTGGTATGTTTATACGCGGATTATTCTGTGCGAGTGGGTTTGTGGCAGTGCGAATTGGAGAAAGCGAGTGTTGTGCGTGAGCCGAGGGAAGCAGATACTCTGCTGTTAAAGCAGTCTGATGACATCTGGATGAGGGGAGATTCTGTGGCGGATGCCACAACCTCAGCTTAAGGCCGTCTTATCATGATCCCGCACTCCAAATAGCCCCCACACACACATATATGAACCTATGCACACAAAAAAACCCCAGTATGCTTTTGCTGCTCACCATAACGCAACATGCACTGGAGTTTAGCGTTAACAGTGGTGCCATATAAGATATATGGAGTCTACGACTACATGTGTCAAGTAAAATGGATCGTTGCCCCTGCAACACATTTTCAATTCCAGCGTAATCTGCTGCCTTTCAGATGTTATTACAGTTAAACAGCCTGGAAAAAATCCTCACTCTCACGCAAAAACAGACCAAAAAAAGAAAAAGAAAATCGGCTTGTTGTGCTAAGAAGGTTGACAGTGAGTGAGAAATGTGTTTGGGGGAAAGGATCTTGATGGATGGACTCTTTGCATCCTTCTAGGACTCTGGGTTAATAGAGATCTTTACAGAATGTCCTAGGCGCTGGTCCAGGACCAGATCTGTATCCTTTCTGATGGTCAAGATTAATGCTGATGAGAGAGAAGCAGTGTGAAGAATGTTGTAACCTTTGTTTCTTATATTTGGCCAAAATTTATATGATATATAATGAATGTATAAGGGGCAAGTGTATTTTTGATGCTGAAAACGGTCACTTTTTTTTTTCTTAGCTTATTTTTAGCACTTTCTTGCAGTTTTCGAAATGTGTAGTGTGTACAACAAAGCACCTGACCTTCTATTGGAAGTGTGATGAATCATACCCCCCCCCCTTCTTTTAATTACCCTTTTGCATTTTGCTGTTCATTAAAAGGTGTGACAAATTAATTTTTAGAAGTACAAATACTCCATGTGGCTTCTCAATGAAAAGCAGGTCATAAAAAATGCATGCATAATAATTAGAAAATGTTGTTTTGGTGGAGTAAGGCATGTCACACTGCAGGACACTTATGTGATTGTCATGTCACAGAACCCATGTATGAACTGATGATTCGTTATTTATTAGTTGATGTCATTAGTGTAATTAAGAGGAAAATAGATAGCCTCCATTTTTGTTAGTCTAAAATGCCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_04525428_04534655.mRNA True 2017 mRNA 0.41 4 4525001 4535684

Neighbor

gene id symbol gene type direction distance location
CI01000034_04473631_04513799 RFX1, RFX1A coding upstream 10456 4473631 ~ 4514545 (+)
CI01000034_04364393_04367046 S1PR5, S1PR5A coding upstream 157797 4364314 ~ 4367204 (+)
CI01000034_04282490_04284734 NA coding upstream 239465 4282490 ~ 4285536 (+)
CI01000034_04260286_04274615 NA coding upstream 249599 4260286 ~ 4275402 (+)
CI01000034_04251494_04257594 ANKRD54 coding upstream 267144 4251494 ~ 4257857 (+)
CI01000034_04548660_04597274 GRIN2C coding downstream 12903 4548587 ~ 4597396 (+)
CI01000034_04641898_04648112 NA coding downstream 105342 4641026 ~ 4648150 (+)
CI01000034_04728112_04738169 GAA coding downstream 191165 4726849 ~ 4738327 (+)
CI01000034_04746797_04771378 TBC1D16 coding downstream 211113 4746797 ~ 4771931 (+)
CI01000034_04811319_04813561 CBX4 coding downstream 275635 4811319 ~ 4814665 (+)
G170178 NA non-coding upstream 78092 4443628 ~ 4446909 (+)
G170205 NA non-coding upstream 108150 4410355 ~ 4416851 (+)
G170232 NA non-coding upstream 115742 4405633 ~ 4409259 (+)
G170563 NA non-coding upstream 161879 4362728 ~ 4363122 (+)
G170562 NA non-coding upstream 163691 4360819 ~ 4361310 (+)
G170223 NA non-coding downstream 14811 4550495 ~ 4562847 (+)
G170579 NA non-coding downstream 86155 4621839 ~ 4622328 (+)
G170620 NA non-coding downstream 171979 4707663 ~ 4707873 (+)
G170644 NA non-coding downstream 236622 4772306 ~ 4773521 (+)
G170645 NA non-coding downstream 237976 4773660 ~ 4777068 (+)
CI01000034_04192675_04200041 NA other upstream 326800 4192311 ~ 4200636 (+)
CI01000034_04125435_04125780 RPRML other upstream 398190 4125100 ~ 4126825 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other upstream 1073152 3432846 ~ 3438839 (+)
G169806 NA other upstream 2187311 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 2793824 1729413 ~ 1731179 (+)

Expression


Co-expression Network