G169052


Basic Information

Item Value
gene id G169052
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 101049 ~ 102040 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU192023
TACTTTATTCACAAATGCCCAATGTCCAAAACCCTTTCTTTGTATAAGGATTTACGTAACGAACTTGCTCTTGAAGCCACTTAATGCTGTGAAAAATGTAAACGGCACATATAGACTATTGTAAAATATTATGAATCTGTATGTTGCCTGTTTTATAATATTGTTTTCTTTAGTTCTATGTTGCTTTACAGTTGTTGACGGTGTCACACAGTAAATAAAAATAGAGCGCATTGTGAAAAAATACAATATCCCACATATTGTTCTTGAGGTTATACTGCACATTTCGGCAAACGTAACAGGTTTCCACACAGTGTATATACTGCATACTGCAGAAAAATATGTTAGCTAGCATGCCATTCTGATCCAAAATGCCTGCAACAAAATCTTCCAAGCGTTTTTTTCTGTTATGCTAATTATTGGCAAGTGTTAAATGAAAGTCTAAGTGCTTCCAAAGTGTTAAATTACATATCCAAGTAACAGACAAACACATTATTGTAGTGTAAACATGACATTGAAATGTGCAGACTGCAGGACGTTTTGCAAAAATTGTGCAATCAAGTTGACACTATTTCAGCATAACTCCAGCCCACATTCACAGTCTATGCACAGCATGTCGGTTCATAGTTCAGCAGGAAGACATGGCCTCTTGAGGTTACATGTATTTTAGACAACAGAGAAGTGGCAAAAAGAGGAAATGTACAAACAATAAAAGCCTCAGAGAGGTATAAGGTTTTAGTTTGTATCATGACTCAAGCACCTATATCATGAATTTGAGTCATTATGTCATTGTTCATTGCCACAGAAGGTGTTGATTGGTAGAGTGAGAGTCTTGTTCAGGTATTTGTTCAGTGATTCAACTCCCTCTCCAAAACTGTACTTGGACTTGGTACTCGGCTGATGGCAGTATCCCGGGTCCAAGCATGGAGAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192023 True 930 lncRNA 0.37 2 101049 102040

Neighbor

gene id symbol gene type direction distance location
CI01000034_00123919_00185433 NTN1B, NTN1.L, NTN1A, NTN1 coding downstream 21879 123919 ~ 185433 (+)
CI01000034_00229261_00311362 USP43B coding downstream 127221 229261 ~ 311958 (+)
CI01000034_00393749_00410314 GRB2A, GRB2B, GRB2, GRB2.S, GRB2.L coding downstream 291620 393660 ~ 410338 (+)
CI01000034_00422322_00453621 BPTF coding downstream 319435 421475 ~ 453644 (+)
CI01000034_00455762_00459788 KPNA2, IMA2 coding downstream 353105 455145 ~ 459927 (+)
G169087 NA non-coding upstream 29083 66609 ~ 71966 (+)
G169083 NA non-coding upstream 56413 44301 ~ 44636 (+)
G169064 NA non-coding upstream 57890 14185 ~ 43159 (+)
G169061 NA non-coding upstream 88166 12107 ~ 12883 (+)
G169117 NA non-coding downstream 94352 196392 ~ 196748 (+)
G169170 NA non-coding downstream 450895 552935 ~ 553203 (+)
G169172 NA non-coding downstream 453147 555187 ~ 556623 (+)
G169173 NA non-coding downstream 454688 556728 ~ 556959 (+)
G169174 NA non-coding downstream 455067 557107 ~ 559241 (+)
CI01000034_00643011_00645310 RBX1 other downstream 540957 642901 ~ 645310 (+)
G169309 NA other downstream 867221 969261 ~ 969921 (+)
G169357 NA other downstream 1001500 1053543 ~ 1119019 (+)
G169394 NA other downstream 1048257 1150297 ~ 1193560 (+)
G169340 NA other downstream 1148179 1250219 ~ 1310878 (+)

Expression


Co-expression Network