Gene
RNA
| Item | Value |
|---|---|
| gene id | G169117 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 196392 ~ 196748 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU192114 | True | 326 | lncRNA | 0.40 | 2 | 196392 | 196748 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_00123919_00185433 | NTN1B, NTN1.L, NTN1A, NTN1 | coding | upstream | 10959 | 123919 ~ 185433 (+) |
| CI01000034_00229261_00311362 | USP43B | coding | downstream | 32513 | 229261 ~ 311958 (+) |
| CI01000034_00393749_00410314 | GRB2A, GRB2B, GRB2, GRB2.S, GRB2.L | coding | downstream | 196912 | 393660 ~ 410338 (+) |
| CI01000034_00422322_00453621 | BPTF | coding | downstream | 224727 | 421475 ~ 453644 (+) |
| CI01000034_00455762_00459788 | KPNA2, IMA2 | coding | downstream | 258397 | 455145 ~ 459927 (+) |
| CI01000034_00486238_00516732 | SMURF2 | coding | downstream | 289490 | 486238 ~ 517524 (+) |
| G169052 | NA | non-coding | upstream | 94352 | 101049 ~ 102040 (+) |
| G169087 | NA | non-coding | upstream | 124426 | 66609 ~ 71966 (+) |
| G169083 | NA | non-coding | upstream | 151756 | 44301 ~ 44636 (+) |
| G169064 | NA | non-coding | upstream | 153233 | 14185 ~ 43159 (+) |
| G169061 | NA | non-coding | upstream | 183509 | 12107 ~ 12883 (+) |
| G169170 | NA | non-coding | downstream | 356187 | 552935 ~ 553203 (+) |
| G169172 | NA | non-coding | downstream | 358439 | 555187 ~ 556623 (+) |
| G169173 | NA | non-coding | downstream | 359980 | 556728 ~ 556959 (+) |
| G169174 | NA | non-coding | downstream | 360359 | 557107 ~ 559241 (+) |
| G169220 | NA | non-coding | downstream | 391155 | 587903 ~ 588144 (+) |
| CI01000034_00643011_00645310 | RBX1 | other | downstream | 446249 | 642901 ~ 645310 (+) |
| G169309 | NA | other | downstream | 772513 | 969261 ~ 969921 (+) |
| G169357 | NA | other | downstream | 906792 | 1053543 ~ 1119019 (+) |
| G169394 | NA | other | downstream | 953549 | 1150297 ~ 1193560 (+) |
| G169340 | NA | other | downstream | 1053471 | 1250219 ~ 1310878 (+) |
