Gene
RNA
| Item | Value |
|---|---|
| gene id | G169173 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 556728 ~ 556959 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU192188 | True | 232 | lncRNA | 0.49 | 1 | 556728 | 556959 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_00545816_00547683 | NA | coding | upstream | 8214 | 545816 ~ 548514 (+) |
| CI01000034_00520790_00525323 | DDX5 | coding | upstream | 31155 | 520672 ~ 525573 (+) |
| CI01000034_00486238_00516732 | SMURF2 | coding | upstream | 39204 | 486238 ~ 517524 (+) |
| CI01000034_00455762_00459788 | KPNA2, IMA2 | coding | upstream | 96801 | 455145 ~ 459927 (+) |
| CI01000034_00422322_00453621 | BPTF | coding | upstream | 103084 | 421475 ~ 453644 (+) |
| CI01000034_00615867_00624387 | MIEF1 | coding | downstream | 57999 | 614958 ~ 625820 (+) |
| CI01000034_00637189_00642362 | NA | coding | downstream | 80011 | 636970 ~ 642439 (+) |
| CI01000034_00643011_00645310 | RBX1 | coding | downstream | 85942 | 642901 ~ 645310 (+) |
| CI01000034_00661553_00677752 | XPP3, XPNPEP3 | coding | downstream | 104594 | 661553 ~ 679148 (+) |
| CI01000034_00683973_00725610 | EP300, EP300B | coding | downstream | 127014 | 683973 ~ 725905 (+) |
| G169172 | NA | non-coding | upstream | 105 | 555187 ~ 556623 (+) |
| G169170 | NA | non-coding | upstream | 3525 | 552935 ~ 553203 (+) |
| G169117 | NA | non-coding | upstream | 359980 | 196392 ~ 196748 (+) |
| G169052 | NA | non-coding | upstream | 454688 | 101049 ~ 102040 (+) |
| G169087 | NA | non-coding | upstream | 484762 | 66609 ~ 71966 (+) |
| G169174 | NA | non-coding | downstream | 148 | 557107 ~ 559241 (+) |
| G169220 | NA | non-coding | downstream | 30944 | 587903 ~ 588144 (+) |
| G169221 | NA | non-coding | downstream | 32895 | 589854 ~ 590199 (+) |
| G169215 | NA | non-coding | downstream | 55477 | 612436 ~ 613239 (+) |
| G169309 | NA | other | downstream | 412302 | 969261 ~ 969921 (+) |
| G169357 | NA | other | downstream | 546581 | 1053543 ~ 1119019 (+) |
| G169394 | NA | other | downstream | 593338 | 1150297 ~ 1193560 (+) |
| G169340 | NA | other | downstream | 693260 | 1250219 ~ 1310878 (+) |
