G169250


Basic Information

Item Value
gene id G169250
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 770743 ~ 771116 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU192269
TATTATTTATATTGTGAGTATTAGGCTTATCATTATTGCTGATCACTGTTGTTGTGCTATGATATTGTAATATTTACCATTATATAATCAGAGGAGTATAGAAAAGTTTATGAAAGTGTCACTTCACAATACAACAGCAAAATATATAAGTATAGTATTTTTATGTTACATTAATACCCATTGTGCGCGCTGTATCTTTAATACCGCGTGGTTTATATACATCTTGCCGCTGATTGGGCTGACATTTCTGACACACCCACCAAACAAGAGAAAACGTATCTCAAACCCGTTGCACACCGTTTCCAGGAAACATGTCGTTCAACCCGGAAAACGTAGCAAAACGTTGCGCACCGGTTTGAGCTCGAATGTGCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192269 True 374 lncRNA 0.38 1 770743 771116

Neighbor

gene id symbol gene type direction distance location
CI01000034_00735558_00738466 DESI1A, DESI1 coding upstream 31268 735487 ~ 739475 (+)
CI01000034_00683973_00725610 EP300, EP300B coding upstream 44838 683973 ~ 725905 (+)
CI01000034_00661553_00677752 XPP3, XPNPEP3 coding upstream 92266 661553 ~ 679148 (+)
CI01000034_00643011_00645310 RBX1 coding upstream 125433 642901 ~ 645310 (+)
CI01000034_00637189_00642362 NA coding upstream 128304 636970 ~ 642439 (+)
CI01000034_00785411_00801907 NA coding downstream 13429 784545 ~ 803844 (+)
CI01000034_00821815_00825192 NA coding downstream 49479 820595 ~ 825205 (+)
CI01000034_00860887_00862727 NA coding downstream 89771 860887 ~ 862901 (+)
CI01000034_00943362_00945523 NA coding downstream 172246 943362 ~ 945631 (+)
CI01000034_00951238_00955839 NA coding downstream 179351 950467 ~ 956087 (+)
G169245 NA non-coding upstream 6627 763886 ~ 764116 (+)
G169203 NA non-coding upstream 36650 733755 ~ 734093 (+)
G169205 NA non-coding upstream 37295 732615 ~ 733448 (+)
G169254 NA non-coding downstream 33577 804693 ~ 816630 (+)
G169210 NA non-coding downstream 100886 872002 ~ 872400 (+)
G169259 NA non-coding downstream 103661 874777 ~ 875411 (+)
G169260 NA non-coding downstream 105694 876810 ~ 877053 (+)
G169309 NA other downstream 198145 969261 ~ 969921 (+)
G169357 NA other downstream 332424 1053543 ~ 1119019 (+)
G169394 NA other downstream 379181 1150297 ~ 1193560 (+)
G169340 NA other downstream 479103 1250219 ~ 1310878 (+)
CI01000034_01729413_01730790 EVE1 other downstream 955394 1729413 ~ 1731179 (+)

Expression


Co-expression Network