G169259


Basic Information

Item Value
gene id G169259
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 874777 ~ 875411 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU192279
AGAGATGTCTGACAAAAGTGGTCAAACTTTTTGTTAAATATTTTATAAATATTTTGTATGCATATTGTGAAGTTGTGTCTGGAGTGTAAAACTAATGCAAGTGTTTCACATTTCGGCTGTACCATTTGTCATGTATTAGCTATATTATTAGATAGATAGATAGATAGATATTATTAGATTAGATATTTTGTGGGTTTTAGTGAAAATAACCAGATGGAAGGAGCTGTCCTCGGCAACCACGGAGGATATTGTTAAAATAGCTAAATCTGATTATTGCTCATGTGCTGGATGTGAATGGTCACAATCAAGTAACTAGTAAGGCAATGCATTACTTTTAAATTGACAACAGAATATCTGAGTTACTTTTTCAAATAAGTAAGTTTCTTTGTTTTTCTATTTATTGACTGTTCTGGACTAACCATGAGCATTTACTCATCTCACTTGAGCTTTTGAAAACCTTTGAAATTATAAACCTGAATTTTGGTAAGTCATGCAGGTCTTCCAATGAAGCTCAACTTTAAAACTTTAAAAACTTAAGGAGGGTTAGAAAGAAGTTAAGCATGACACATGCACAAAGTTTAGTGACTCAATGCCCAGAAGAATGACTGCTGTAATCAAAAACAAGGAAGAACCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192279 True 635 lncRNA 0.33 1 874777 875411

Neighbor

gene id symbol gene type direction distance location
CI01000034_00860887_00862727 NA coding upstream 11876 860887 ~ 862901 (+)
CI01000034_00821815_00825192 NA coding upstream 49572 820595 ~ 825205 (+)
CI01000034_00785411_00801907 NA coding upstream 72718 784545 ~ 803844 (+)
CI01000034_00735558_00738466 DESI1A, DESI1 coding upstream 135302 735487 ~ 739475 (+)
CI01000034_00683973_00725610 EP300, EP300B coding upstream 148872 683973 ~ 725905 (+)
CI01000034_00943362_00945523 NA coding downstream 67951 943362 ~ 945631 (+)
CI01000034_00951238_00955839 NA coding downstream 75056 950467 ~ 956087 (+)
CI01000034_01124686_01125224 NA coding downstream 249275 1124686 ~ 1126197 (+)
CI01000034_01139725_01146104 BAIAP2L2A coding downstream 264314 1139725 ~ 1146324 (+)
CI01000034_01210160_01223724 NA coding downstream 334749 1210160 ~ 1223869 (+)
G169210 NA non-coding upstream 2377 872002 ~ 872400 (+)
G169254 NA non-coding upstream 58147 804693 ~ 816630 (+)
G169250 NA non-coding upstream 103661 770743 ~ 771116 (+)
G169245 NA non-coding upstream 110661 763886 ~ 764116 (+)
G169260 NA non-coding downstream 1399 876810 ~ 877053 (+)
G169262 NA non-coding downstream 18208 893619 ~ 910887 (+)
G169275 NA non-coding downstream 36590 912001 ~ 912287 (+)
G169308 NA non-coding downstream 90442 965853 ~ 966104 (+)
G169312 NA non-coding downstream 104100 979511 ~ 982209 (+)
CI01000034_00643011_00645310 RBX1 other upstream 228367 642901 ~ 645310 (+)
G169309 NA other downstream 93850 969261 ~ 969921 (+)
G169357 NA other downstream 228129 1053543 ~ 1119019 (+)
G169394 NA other downstream 274886 1150297 ~ 1193560 (+)
G169340 NA other downstream 374808 1250219 ~ 1310878 (+)
CI01000034_01729413_01730790 EVE1 other downstream 851099 1729413 ~ 1731179 (+)

Expression


Co-expression Network