G169300


Basic Information

Item Value
gene id G169300
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 1062255 ~ 1062988 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU192326
TTTTAAACAAAGCATTAAGACATGTTAAACTGCGCCCCATAAACTCAATCAAGCCTAGAAAAAAAAAACAGTGAACCACCCCTTTAAGGAACATTGACATGGACAGGCTAAATGACTGGAGGTTGACCATGGTTGCTGTCATTCAAATCATCAACTATCAGTTATTAAAATGAATGTCCTCTTGTTGCTTTTAATTTAAAAAACTGATATTAACTTTTTGACACATTGACAATCAACCCACAGCATGATGTTATAAGAGCTTAAAGACAGTTTTAAACTCCTTCTTGAATGCTTCCTTCAGCCGAGAGTTCATTTTACTGGAGTCATTATCTCCGCTGGAGGTGCAACAGTTGTTAAAAATCTGTTCAATATCGGAGACAAACTCTTGCACTGTTTGATAATCGTTATTCTCCAGGTTCAGCTTCACTCTGCCCAGCATCATGGGACCATAAATGTTTTTACTGTATCCTGAAACCTGAACACCAGCAGTGCAGACGTCACATACATGTACACCACATATAAGAGCTTTAAATAATGACAAAGAGGAAGATGCAGCTGCTAAAGATGAGATTTACATTAGTGCAGGGGTCAGTCATGCTCTCATGTAGCAGGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192326 True 615 lncRNA 0.38 2 1062255 1062988

Neighbor

gene id symbol gene type direction distance location
CI01000034_00951238_00955839 NA coding upstream 106168 950467 ~ 956087 (+)
CI01000034_00943362_00945523 NA coding upstream 116624 943362 ~ 945631 (+)
CI01000034_00860887_00862727 NA coding upstream 199354 860887 ~ 862901 (+)
CI01000034_00821815_00825192 NA coding upstream 237050 820595 ~ 825205 (+)
CI01000034_00785411_00801907 NA coding upstream 260196 784545 ~ 803844 (+)
CI01000034_01124686_01125224 NA coding downstream 61698 1124686 ~ 1126197 (+)
CI01000034_01139725_01146104 BAIAP2L2A coding downstream 76737 1139725 ~ 1146324 (+)
CI01000034_01210160_01223724 NA coding downstream 147172 1210160 ~ 1223869 (+)
CI01000034_01305634_01306636 NA coding downstream 242646 1305634 ~ 1306844 (+)
CI01000034_01383935_01395565 NA coding downstream 320603 1383591 ~ 1396448 (+)
G169302 NA non-coding upstream 40431 993160 ~ 1021824 (+)
G169312 NA non-coding upstream 80046 979511 ~ 982209 (+)
G169308 NA non-coding upstream 96151 965853 ~ 966104 (+)
G169275 NA non-coding upstream 149968 912001 ~ 912287 (+)
G169262 NA non-coding upstream 151368 893619 ~ 910887 (+)
G169366 NA non-coding downstream 9172 1072160 ~ 1073203 (+)
G169368 NA non-coding downstream 11732 1074720 ~ 1075808 (+)
G169365 NA non-coding downstream 15347 1078335 ~ 1080864 (+)
G169351 NA non-coding downstream 19715 1082703 ~ 1083262 (+)
G169352 NA non-coding downstream 24431 1087419 ~ 1090273 (+)
G169309 NA other upstream 92334 969261 ~ 969921 (+)
CI01000034_00643011_00645310 RBX1 other upstream 415845 642901 ~ 645310 (+)
G169357 NA other downstream 40552 1053543 ~ 1119019 (+)
G169394 NA other downstream 87309 1150297 ~ 1193560 (+)
G169340 NA other downstream 187231 1250219 ~ 1310878 (+)
CI01000034_01729413_01730790 EVE1 other downstream 663522 1729413 ~ 1731179 (+)
G169806 NA other downstream 1254985 2317973 ~ 2337690 (+)

Expression


Co-expression Network