XLOC_000905 (si:zfos-1011f11.2)


Basic Information

Item Value
gene id XLOC_000905
gene name si:zfos-1011f11.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 60979 ~ 65017 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001431
ATGGCCGAGAGAACACACCGATTTCTGGTGCTGTCGGTGCTCAGATGCTGGATCTCCCTGCTGGGCTTTACAGCGGTGCAGGTGTCGGTGCGGGACTCTCGCCGGTTCGCCCTGCTTTTCCAGCCAGTAGTGCTGCAGTGCCGGTACAGCAGTGTGTCCACGCAGACGCCGGTGGTGCAGTGGTGGTTTAAGTCTTTCTGCCGCGACCGCGCACGAGACTCCTTCCGCTTCCCACAAGCGCCGccagtgcgcacacacacactcacacactctgaACTCGAGCATGAGCCCTCTGGTCAGCGGGACTGCGGGGACAGCGGCCGCACCGTGCGCATTGTGGCGTCAAGTCAGGGGCCGGCATACACCCTGGCGGAACACTACCGGGGCCGAGACATCGCCATCATCAACAaagCTGACCTGCGCATTGGCGAGCTGCAGTGGGGTGACAGTGGTGTTTATTATTGTAAAGTGGTGATTTCGGATGATCTGGAGGGACAGAATGAAGACCACGTGGAGCTGCTGGTTCTGGGTGAGTGA
>TCONS_00001432
gtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgcgtgcgagagagagagagagcctacTGTGCCGAGACGGAGCTCCTCCTCGGTGTGTGTCGGTAACGCGCGCGCCTCACAGTCCCGTTATTCCCGACAGCAGAACACACGGGCGAGCAGGAATGGAAAACCGGAGGAAAACACGCGACATGGCCGAGAGAACACACCGATTTCTGGTGCTGTCGGTGCTCAGATGCTGGATCTCCCTGCTGGGCTTTACAGGTGTGTGTGCAGCGGTGCAGGTGTCGGTGCGGGACTCTCGCCGGTTCGCCCTGCTTTTCCAGCCAGTAGTGCTGCAGTGCCGGTACAGCAGTGTGTCCACGCAGACGCCGGTGGTGCAGTGGTGGTTTAAGTCTTTCTGCCGCGACCGCGCACGAGACTCCTTCCGCTTCCCACAAGCGCCGccagtgcgcacacacacactcacacactctgaACTCGAGCATGAGCCCTCTGGTCAGCGGGACTGCGGGGACAGCGGCCGCACCGTGCGCATTGTGGCGTCAAGTCAGGGGCCGGCATACACCCTGGCGGAACACTACCGGGGCCGAGACATCGCCATCATCAACAaagCTGACCTGCGCATTGGCGAGCTGCAGTGGGGTGACAGTGGTGTTTATTATTGTAAAGTGGTGATTTCGGATGATCTGGAGGGACAGAATGAAGACCACGTGGAGCTGCTGGTTCTGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101073

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001431 False 537 mRNA 0.60 3 60979 64829
TCONS_00001432 True 729 mRNA 0.60 3 60987 65017

Neighbor

gene id symbol gene type direction distance location
XLOC_000904 ildr1a coding downstream 10732 44839 ~ 50247 (-)
XLOC_000903 tmem39a coding downstream 16414 39313 ~ 44565 (-)
XLOC_000902 rpl24 coding downstream 48952 6408 ~ 12027 (-)
XLOC_000906 gpa33a coding upstream 688 65705 ~ 71523 (-)
XLOC_000907 FP067451.1 coding upstream 43268 108285 ~ 147846 (-)
XLOC_000908 NA coding upstream 76272 141289 ~ 142119 (-)
XLOC_000909 pcid2 coding upstream 86990 152007 ~ 157563 (-)
XLOC_000910 FO681286.1 coding upstream 95285 160302 ~ 206208 (-)
XLOC_000927 NA non-coding upstream 713558 778575 ~ 779614 (-)
XLOC_000929 NA non-coding upstream 940920 1005937 ~ 1014866 (-)
XLOC_000930 CU611053.1 non-coding upstream 985924 1050941 ~ 1051057 (-)

Expression


Co-expression Network