CI01000037_02279319_02280446 (GPR45)


Basic Information

Item Value
gene id CI01000037_02279319_02280446
gene name GPR45
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 2279158 ~ 2280756 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_02279319_02280446.mRNA
TTATTAATATACCTCACACTTTTGGTCTTCTGTTGCAGGTTATGTTTTTACAACGTCTTCAGTGTGGAGAGTAATTCTCTTAATGGGAGTTCACATAACCATGACAATGGTTTAGCTTTGACTTTCCAGGTTTGAATGGATGATACCTGGTAACAGCTGCCATGTTTTCCTGTAATGGCAGCTCATTGGAGGAGTGTGGCCTTCTTGAACCAATGGAAACTGAGATGCAAGAGTCTGATACTGCCCTCATGCCCACCACTCTCAGGGTGGCACTGGCTGCCATCATGATCTTCATGATCACCATCGGTTTCCTCGGCAATGCCATTGTGTGTCTGATAGTGTATCAGAAACCAGCCATGCGTTCAGCGATTAATCTGCTCCTGGCCACGCTGGCCTTCTCTGACATCATGCTGTCATTGCTATGCATGCCATTCACCGCCGTCACTCTCGCAACTACGGACTGGAGCTTTGGAGTGGGATTCTGCCGCGTGTCCGTCATGCTGTACTGGCTGTTTGTTCTGGAAGGTGTGTCCATCCTTCTGATCATCAGCGTCGATCGCTTCCTCATTATAGTTCAGCGGCAGGACAAGCTGACGCCACATCGGGCGAAAATTCTCATTGCCGCGTCATGGGCTCTGTCGCTCTGCGTGTCCCTACCGTCCGTGGTTGGCTGGAGGACAGCTGGGATCGGTGCGCAAGTGCCGCAATGCATTCTGGGATACAGCGAATCGCTGGCGGACCGGGGTTACACGGTTCTGCTAGCGGTCACGGTGTTTTTTGTGCCATTCGGTGTGATGTTGTATTCCTACCTGTGTATTCTCAACACGGTGCGACGCAACGCGCTGCGCATCCACAATCACACCAGTGAAGGCAGCGTCGCCATCAACCATGTCAGCAAGTTAGGTTTAACCGGTCTACAGCGGCCCCAAGTCAATGTGGACATGAGTTTCAAAACCAGGGCCTTCACCACCATCCTCATCCTTTTCATTGGCTTCTCTGTATGTTGGTTGCCACATACGGTGGTGAGCCTGCTGGCGGTGTTCAGTAGACGCTTCTACCTCAGCCCAGCGTTTTACCCGGTCAGCATCGGGGCGCTGTGGTTGAGTTACTTAAAAGCGGTTTTCAACCCTGTGATATATTGCTGGAGAATCCGAAAGTTTCGTGAGGCCTGTCTGGAGTTTATGCCCAAGACTTGTCATCTCTGTCCCAAGATTCCCGGGAGAAGTCGCAGGCGTATAAGACCCAGCAACATCTATGTGTGCAGCAGTGAGACCCAGTCTTCAGTCTAGGATTTGCGCCAAAGTATGTTTAATATTGACAAGCCAAGAATGAAAGATGATGTTTAGATGTAAAACACTTAAGTCATGGTTTCAAGGGACTGTGTCCTTGAAATCCCACGGAGATGAGAACGCTTATGAATTGAATACTTGACAAATACCTCCTTCTATCATAGTCTGCAGTGATGAAGGAAAAAGCATTCAAATTCATCAAAGCAATATTCATATATGTTCCTGAACTAGGTCCTGAACTGAATTTCTTTGATTTCAGTTGGAAAGATTTCACATGTTCTGCAATTTTGTAAAACATGGAAGTTGTCAA

Function

symbol description
gpr45 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human GPR45 (G protein-coupled receptor 45).

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08409 GPR45; G protein-coupled receptor 45

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_02279319_02280446.mRNA True 1599 mRNA 0.48 1 2279158 2280756

Neighbor

gene id symbol gene type direction distance location
CI01000037_02248789_02250329 POU3F3 coding upstream 28037 2248594 ~ 2251121 (+)
CI01000037_02087502_02094770 NA coding upstream 184090 2087502 ~ 2095068 (+)
CI01000037_02065346_02075634 NA coding upstream 202874 2065276 ~ 2076284 (+)
CI01000037_01965864_01966433 COA5, CB064 coding upstream 312723 1965603 ~ 1966435 (+)
CI01000037_01925100_01960498 MGAT4A coding upstream 318436 1925100 ~ 1960722 (+)
CI01000037_02282458_02287205 NA coding downstream 591 2281347 ~ 2287285 (+)
CI01000037_02334480_02338932 NA coding downstream 50708 2331464 ~ 2338989 (+)
CI01000037_02378066_02392175 NCK2A, NCK2 coding downstream 97310 2378066 ~ 2392871 (+)
CI01000037_02405252_02406221 NA coding downstream 124027 2404783 ~ 2406437 (+)
CI01000037_02414352_02418569 C6H2ORF40, ECRG4A coding downstream 133596 2414352 ~ 2418752 (+)
G175693 NA non-coding upstream 135895 2142951 ~ 2143263 (+)
G175689 NA non-coding upstream 139346 2139589 ~ 2139812 (+)
G175674 NA non-coding upstream 205518 2073428 ~ 2073640 (+)
G175670 NA non-coding upstream 214622 2064172 ~ 2064536 (+)
G175641 NA non-coding upstream 219079 2031546 ~ 2060079 (+)
G175630 NA non-coding downstream 17571 2298327 ~ 2300350 (+)
G175767 NA non-coding downstream 21981 2302737 ~ 2303537 (+)
G175769 NA non-coding downstream 31451 2312207 ~ 2312711 (+)
G175777 NA non-coding downstream 132145 2412901 ~ 2413354 (+)
G175858 NA non-coding downstream 325622 2606378 ~ 2609995 (+)
G174949 NA other upstream 664884 1613876 ~ 1614274 (+)
CI01000037_00987906_00988350 NA other upstream 1289399 987859 ~ 989246 (+)
CI01000037_00228809_00230442 NA other upstream 2048762 228809 ~ 230730 (+)
G176346 NA other downstream 559004 2839760 ~ 2840053 (+)
G176377 NA other downstream 696106 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 1932527 4212907 ~ 4218305 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037616 GPR45 coding NC_007120.7 CM002893.2 6623536 ~ 6624663 (-)