CI01000037_02334480_02338932


Basic Information

Item Value
gene id CI01000037_02334480_02338932
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 2331464 ~ 2338989 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_02334480_02338932.mRNA
ATATATATGCGCGCTCTCTCTTGCACGCACACACGCACACTCACACTCGTCTTCTTGAAAGTACACAGATGGATCCCTTCTGCTTGGGAAGAGCATGATTGATCAGACACAACAGATTCAGCCCTTCTCTTTAGCACCCTATTGCCATCAGACTGAACTGATCATTAATTCATTTTCCAGTCATAAACACCATGTGAAGGGCTTCTTGGGCTGTAATTAAGGGTCGCCTGCTCTTAACTGCATGGCTGGTTTTGAATTTCCTCAGTGAAATGGCCATTCTGCACTGGACAGGGCAGGAGTGTGAAATTCAACACCACCTCTAAGTGCTTCATTGCAGCTCAGAGTGAGCAGTAGATTTGGGCCCTGCTTGCCCCTCTCCCCTGCTGATTCAGAGCCTTCTCCTGCCCTCCCCCTCACTCAGACAGGACTGTGCAGAAGAGCAGGACGCAGGCTAAGGTGTAACTAGAAGTCACAGGAATTTGAGTTTCTTTGTCTGATGGCTTTTGGGTAACAGCAGTAAGACCTGCATGTATTCTAAATAAGGATGCAGAGAGAATGGTGATACATTTGGAAAATATCAGAATCGATTCTCGATGCATCGATTTATTGTCCCAGCTCTACTATATAGCTGGTGTGCACGAGCTGATGCGAAACACACAGAGTGGATTGAGCGTGCAGCGGCATAGGGAGCTCGTCAAGCGTACATCCCTTTTTCACAAACATCGCTGGAAAGTTTGTAGTTCGGTCGGATATGGCAGTAGAAAATAAAGTAGAACAAGGTACATATTACTAACGTTAAATGACGATTCAAATTCATATTCAAATTCACATTAAATTCTTTTAAAGGATTAGTTCACTTTCAAATTAAAATTTCCTGATAATTTACTCACCCCCATGTCATCCAAGATGTCCATGTCCCTCTTTCTTCAGTCGAAAAGAAATTAAGGTTTTTGATGAAAACATTCCAGGATTACTCTCCTTATAGTGGACTTCAATTGGCTCCAAACGGTTGAAGGTCAAAATTACAGTTTCAGTGCAGCTTCAAAGGGCTTTAAAGATACCAGAAATGGAATAAGGGTTTTATCTAGCGAAACAATCGATCATTTTCTAAAAAAAAATAAAAATGTATATGCTTTATAAACACAAATAAACTCTTTATAAACTCGCCTCGCAAGTGCTTCCACCAGACCGCCTTCCGTATTCTTCAAAAAGCTTACGCTGTATGTCCTACACGTTCCCTATTCAAATTACAGAACAAACGCTGCGCTAGTTCCATTTTTTCCGTAAGTTGAATAGGGAAGGCAGTCTGGTGGAAGCTAGATATTTTACTTCATAACTTGTTAAATATGGATATTTTTTTGCACAAATGTATCGCTTCGCTTCAGAAGGCCTTTATTAACCCCCCGGAGCCATGTGGAATATGTTTATGATGGATAGATGTGGATGGAAGCACTTTCTTCAGCTCATACTCGTTGATCCCGCTCACTGCCATTATAAAGCTCGGATGCGTCAGGATTTTTATTAATATTTCTCTGATTGTGTTCATCAGAAAGAAGAAAGTCATATACACCTAGGATGGCTTGAGGGTGAGTAAAGCTTGGGCTAATTTTCATTTGAAAGTGAACTAATACTTTAAGCAGCAGAAATTCTTGTATATCAAGTGTTTTAGCAGCTAGAACATGGATAGATGTGTTGAAATAAATGTTGACCATTGCCAGATGTTGGAGACAGTGAGGTTAATTTTCTGTGAGTAGGTGACCAGGCACTGTGTGGGGATATCTGTGACTGCTTCAGAGCTCCACAGCCCAAGGCCTGAGCATTCACAGTCAGCCTCTGAGATAAAGGTCATGACCACAAATTTGTGCTGTCACCCACATAGAAGAAGAGACAGGAGATTGAGCTAGAGGGAGGGTGAGAGATAGAAGGAAAGGAGGAAAAAAGAGAGAGGAAGCAGGGGAGTTCACATGAGAAACTCGCACACAAAACAAAGATGTACCAGTGGGAAGTTGAGCTTTATGTGCTTTCACTGTCAAGTCTGATTCAGTTTGTTCAATGTTTGCTGCTTTGTTTTGTCAGAGGGTTTGTTTGGAGCAGTGTTGGTGGCTGTTGCTCCAGTTAATTTAATTAACTTGGTTTTCTGCTTGTTTGAATCCAATTGTGTGTCTAAGTGTTTGGCATCTCTTAATAAACAGTTGTGTTTTTCACGGTGTTGTTGCTGAGGTCCTGTTAGGTCTTTTTAGGGTTGGCAAGTCTTTTTGGCTCACCAAGACCGCATTTATTTGATTAAATAGTATTACAATTGAAAAGGAAAGTTTTCTATTTGAATATGTTTTAAACACATTTTTCCTGTTTTTCAGCAGCCATTACACTGGTCTTCAGTGTCACATAATTCATAGGCACCCACTCCCCATATTTTTTTGTCAAGCTATGTTGTAAAGCTAAATATAAAGGTAGAATTGCATTTATTATGACCCCCTGGGACCCGATGTGAGATCCACCAATCAGAGAGTTTCCCAAATCACAATCAAATTTTTGATTGGTTAAAATTAACGGAGAGTATCTCTCATGTTTTCCCTTGGAAGCTCGACCGATTGGCGACTATGACATGATCCATCATCATTCTAATATGCTGATTTTCTGCTCAAGAAACATTTTTTATTATCAGTGTTGAAAGGTTGTGCTGCTTAATATTTTTGTGGAAACCGTGATACATTTTTCAGGTTTTGGTTTGAATAGAAAGTTCAAAAGAACAGCATTTACTTAAAATAGACTTTTTTAACATTATAAATGCCTTTACTGTTACTTTTTAAAACATCTTTGGGTCTATTAATTGCCTGAAAGAAAAGAAAGTTATTTCCTTTTATAGCACTTTCATACTCATAAATTATGAGCAGACATGGAACTAGCCCATCTATACAGGAATTAGAAAATAAAAATCATTACAAATAATGAATATATCATTAATATCTAATATCTACTGTAGCTCAGCCCTGTTCCCTATACAATAAACGCACTCATGCATATTAAGAAAGCCATAGCAAACTTTCTGAGGATACCTGAATCCCTTCTTGGAAGGCAGACATATATACGCCATAATGTGAATTTGATACCCGGAGTCTTTCCTTATCTTCCCTATTCTTTTAGTTCAGGGAACGGATGTAGAGTAGGACGCTTTAAGCTGTGTTTACATCAAGAGTTACGTAATCCTATAGCTATTTTCCATCTCCGGACCTATTCTTTCTCTTTCCCCCCTTTTCTTTTTCTTCTGGGAGTCATAATCTGCGAGGTCACTCATGTTAAACTGTTAAGACACCCCTTTGTTCATGTCCCATTTGTGGATCCAATGAGCCCACCGCTTTGTGTTCGTACCCCTGCACTGAGTCCACTGGCCCTGCCCTGGTTGTGCCGCAGTGTGAATTGCATGTCGGCTGAGTGTGCAAAACCCTTGGAGATTAAACACCACAGCATCAGTTGGCAAACCTGGAACTGTTCGGCTGTGAATGCGAGTATGGGCTGCAGCTTTGATGGATGTAACAGATTGGATGCCGAGGGGTTAATCTCTGTGAACCTCAATGCAGTAAGTATAAATGAGAATGGAAAAAATGAGTATGAATGGCAGAGAGACAAGCGACAGGAACGACCTGACCTGAACTTGCACTGCGGAGACGAGAGTCTTGGGCTGTTGCCAACTCGCCTGTTTGTTTTGTATGACTGGAGCCTGGGCGGCGTGGTATGTTAGCATATTATTTATTTGTACATGTGCTCACTCATACACGGTTACAAACTTAAGAGCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_02334480_02338932.mRNA True 3796 mRNA 0.41 4 2331464 2338989

Neighbor

gene id symbol gene type direction distance location
CI01000037_02282458_02287205 NA coding upstream 44179 2281347 ~ 2287285 (+)
CI01000037_02279319_02280446 GPR45 coding upstream 50708 2279158 ~ 2280756 (+)
CI01000037_02248789_02250329 POU3F3 coding upstream 80343 2248594 ~ 2251121 (+)
CI01000037_02087502_02094770 NA coding upstream 236396 2087502 ~ 2095068 (+)
CI01000037_02065346_02075634 NA coding upstream 255180 2065276 ~ 2076284 (+)
CI01000037_02378066_02392175 NCK2A, NCK2 coding downstream 39077 2378066 ~ 2392871 (+)
CI01000037_02405252_02406221 NA coding downstream 65794 2404783 ~ 2406437 (+)
CI01000037_02414352_02418569 C6H2ORF40, ECRG4A coding downstream 75363 2414352 ~ 2418752 (+)
CI01000037_02527352_02576225 TMTOPS2B coding downstream 187113 2526102 ~ 2576704 (+)
CI01000037_02700254_02707760 GPR89B, GPR89, GPR89A, GPR89B.L coding downstream 360606 2699595 ~ 2708474 (+)
G175769 NA non-coding upstream 18753 2312207 ~ 2312711 (+)
G175767 NA non-coding upstream 27927 2302737 ~ 2303537 (+)
G175630 NA non-coding upstream 31114 2298327 ~ 2300350 (+)
G175628 NA non-coding upstream 35608 2144062 ~ 2295856 (+)
G175693 NA non-coding upstream 188201 2142951 ~ 2143263 (+)
G175777 NA non-coding downstream 73912 2412901 ~ 2413354 (+)
G175858 NA non-coding downstream 267389 2606378 ~ 2609995 (+)
G175871 NA non-coding downstream 286415 2625404 ~ 2626599 (+)
G175875 NA non-coding downstream 297106 2636095 ~ 2636309 (+)
G175877 NA non-coding downstream 306850 2645839 ~ 2646168 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 361073 1965603 ~ 1966435 (+)
G174949 NA other upstream 717190 1613876 ~ 1614274 (+)
CI01000037_00987906_00988350 NA other upstream 1341705 987859 ~ 989246 (+)
CI01000037_00228809_00230442 NA other upstream 2101068 228809 ~ 230730 (+)
G176346 NA other downstream 500771 2839760 ~ 2840053 (+)
G176377 NA other downstream 637873 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 1874294 4212907 ~ 4218305 (+)

Expression


Co-expression Network