CI01000037_02405252_02406221


Basic Information

Item Value
gene id CI01000037_02405252_02406221
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 2404783 ~ 2406437 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_02405252_02406221.mRNA
TCATAAAAGGAATGGAATAGCCTTCATCTGTCAAAAGAATAATAGACTGGAAACCATACAAAAAGTAGTATTGAAAAAGTTTTTTGGAATCCAAAGTTGGACTTTAGAAATGTGCATAGGCTACTTCGGGAAATTAGACAGTTGTATTGCAATTTTCACACTTCATTACTATGAACAAAACTGTACTAAGATTATATTTTCTAATTACAAATTTGCATGATTTGCATTTAAAATGACTTTGTAAATGTGACACAATATGCAATGAGTAATGACCGTGAAAATGGGGATTTCATTTTTTTTTTTTTTGACTATTTTTCAACAAAAAAGTAAATTTCTTCAGAAACTTCCAAACTGAATAAATGTTTGTATTGAAGTCACAGAGCTATATTAAGCCTATAAGCTCTTATTAGTCGATAGCATTTTTGCAATCATTCTCTCCCATGATTTGTTCAGCACACAGGGGGACGTGATGTCTCATATCCGCGTATTCGTGCTCCTCTGCACCTTCCTGACGATTTTCTTCTGTGCAGCAGGTGTTCCAGCTCACAGGGAGATCAGGGTGAAGAGGAGTCTACCGTACTGGAACCTGTGGTCCTCTGATTTTTACGGCTGGGTGGATGAGTTGCGATCTCAGAGCGGATATGACACGCTGCTGGGCTTGGCGAGAGACTACTGGGCTCACTTTCCCATTGCTGGTTTTCTAGGTTACGGAAGCACTCCAGGGCAAGTGGACCATCAAGAGCTGGAAGTTGAAGACTTAAAATAACATGCCATTGTCTTTTCCCGCTGGGCTTCCTCTGTGTACAGTTTCCCCTCCATTAGCTGCCTGGGTTATATCTATTACATGTCTTTTCCTTATGGAATATCACCTTGCGGCATTTCTCTTATCTGTGAATCATTTTTACAGGTTTTCTCTCGCTCACTCTTCAAAGATGTTTATTGTAACCACAACATTAAGCACATTATGTAAATCAGTACAGCA

Function

NR:

description
otospiralin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_02405252_02406221.mRNA True 982 mRNA 0.39 2 2404783 2406437

Neighbor

gene id symbol gene type direction distance location
CI01000037_02378066_02392175 NCK2A, NCK2 coding upstream 11912 2378066 ~ 2392871 (+)
CI01000037_02334480_02338932 NA coding upstream 65794 2331464 ~ 2338989 (+)
CI01000037_02282458_02287205 NA coding upstream 117498 2281347 ~ 2287285 (+)
CI01000037_02279319_02280446 GPR45 coding upstream 124027 2279158 ~ 2280756 (+)
CI01000037_02248789_02250329 POU3F3 coding upstream 153662 2248594 ~ 2251121 (+)
CI01000037_02414352_02418569 C6H2ORF40, ECRG4A coding downstream 7915 2414352 ~ 2418752 (+)
CI01000037_02527352_02576225 TMTOPS2B coding downstream 119665 2526102 ~ 2576704 (+)
CI01000037_02700254_02707760 GPR89B, GPR89, GPR89A, GPR89B.L coding downstream 293158 2699595 ~ 2708474 (+)
CI01000037_02755842_02769590 NA coding downstream 349405 2755842 ~ 2771166 (+)
CI01000037_02907711_02908412 NA coding downstream 500626 2907063 ~ 2908634 (+)
G175769 NA non-coding upstream 92072 2312207 ~ 2312711 (+)
G175767 NA non-coding upstream 101246 2302737 ~ 2303537 (+)
G175630 NA non-coding upstream 104433 2298327 ~ 2300350 (+)
G175628 NA non-coding upstream 108927 2144062 ~ 2295856 (+)
G175693 NA non-coding upstream 261520 2142951 ~ 2143263 (+)
G175777 NA non-coding downstream 6464 2412901 ~ 2413354 (+)
G175858 NA non-coding downstream 199941 2606378 ~ 2609995 (+)
G175871 NA non-coding downstream 218967 2625404 ~ 2626599 (+)
G175875 NA non-coding downstream 229658 2636095 ~ 2636309 (+)
G175877 NA non-coding downstream 239402 2645839 ~ 2646168 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 434392 1965603 ~ 1966435 (+)
G174949 NA other upstream 790509 1613876 ~ 1614274 (+)
CI01000037_00987906_00988350 NA other upstream 1415024 987859 ~ 989246 (+)
CI01000037_00228809_00230442 NA other upstream 2174387 228809 ~ 230730 (+)
G176346 NA other downstream 433323 2839760 ~ 2840053 (+)
G176377 NA other downstream 570425 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 1806846 4212907 ~ 4218305 (+)

Expression


Co-expression Network