CI01000037_02414352_02418569 (C6H2ORF40, ECRG4A)


Basic Information

Item Value
gene id CI01000037_02414352_02418569
gene name C6H2ORF40, ECRG4A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 2414352 ~ 2418752 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_02414352_02418569.mRNA
ACCAACGCCATTGTGCAAATCGACAAGGAAGAAGACAAGAAATCATGGTTTCTGAGAAGTTTTACCTGCGCCTGCTCACCTTTGTGGCCCTACTGACTGTACTGGCTCTCTCAGTGGATGGTGATGTAAAGTCAGCTGCAGCTGTGGCTGTGACTCCCTCCAAGGCCAAACAGTTCCTGGCCTCCCTTAAAAGGCCCAAAAGACACCTGTGGGACCGCAGCCGCCCTGACGTTCAGCAGTGGATCCAACAGTTCATGTACATGGGATTTGATGAAGCAAGACTTGAAACTGATCTCGCCTATTGGATGGACCAGCACCAATCCAATGACCAAGGTCGCCAGCATCACTATGATGAAAACTCTCCCATGGGGCCTCGAAACGCTGGATCATACAGATATGGAGCAAATGTCAACTATGACTACTACTAAAACACCTTGTTCTCCCAGAACCACGTCACTGCTGCCAAGAATATGTTTCGAAGGCATAACCACTCTGATTTACTGCAGTGATGTCAGCTTGCTTCTTTCTTTTGTAGCTTGTACTTCTTTTTGTAAATTGTATTAACAGATAGAAAATCAAGAAAAAGTCAATTTTTAAGGAATAGTTCACAA

Function

symbol description
ecrg4a Acts upstream of or within central nervous system development and regulation of cell population proliferation. Predicted to be located in apical plasma membrane and cytoplasm. Predicted to be active in extracellular space. Is expressed in epidermis; pectoral fin; and pharyngeal arch. Orthologous to human ECRG4 (ECRG4 augurin precursor).

GO:

id name namespace
GO:0042127 regulation of cell population proliferation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_02414352_02418569.mRNA True 611 mRNA 0.45 3 2414352 2418752

Neighbor

gene id symbol gene type direction distance location
CI01000037_02405252_02406221 NA coding upstream 7915 2404783 ~ 2406437 (+)
CI01000037_02378066_02392175 NCK2A, NCK2 coding upstream 21481 2378066 ~ 2392871 (+)
CI01000037_02334480_02338932 NA coding upstream 75363 2331464 ~ 2338989 (+)
CI01000037_02282458_02287205 NA coding upstream 127067 2281347 ~ 2287285 (+)
CI01000037_02279319_02280446 GPR45 coding upstream 133596 2279158 ~ 2280756 (+)
CI01000037_02527352_02576225 TMTOPS2B coding downstream 107350 2526102 ~ 2576704 (+)
CI01000037_02700254_02707760 GPR89B, GPR89, GPR89A, GPR89B.L coding downstream 280843 2699595 ~ 2708474 (+)
CI01000037_02755842_02769590 NA coding downstream 337090 2755842 ~ 2771166 (+)
CI01000037_02907711_02908412 NA coding downstream 488311 2907063 ~ 2908634 (+)
CI01000037_02909777_02910445 NA coding downstream 490848 2909600 ~ 2910489 (+)
G175777 NA non-coding upstream 998 2412901 ~ 2413354 (+)
G175769 NA non-coding upstream 101641 2312207 ~ 2312711 (+)
G175767 NA non-coding upstream 110815 2302737 ~ 2303537 (+)
G175630 NA non-coding upstream 114002 2298327 ~ 2300350 (+)
G175628 NA non-coding upstream 118496 2144062 ~ 2295856 (+)
G175858 NA non-coding downstream 187626 2606378 ~ 2609995 (+)
G175871 NA non-coding downstream 206652 2625404 ~ 2626599 (+)
G175875 NA non-coding downstream 217343 2636095 ~ 2636309 (+)
G175877 NA non-coding downstream 227087 2645839 ~ 2646168 (+)
G175850 NA non-coding downstream 250754 2669506 ~ 2715511 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 443961 1965603 ~ 1966435 (+)
G174949 NA other upstream 800078 1613876 ~ 1614274 (+)
CI01000037_00987906_00988350 NA other upstream 1424593 987859 ~ 989246 (+)
CI01000037_00228809_00230442 NA other upstream 2183956 228809 ~ 230730 (+)
G176346 NA other downstream 421008 2839760 ~ 2840053 (+)
G176377 NA other downstream 558110 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 1794531 4212907 ~ 4218305 (+)

Expression


Co-expression Network