CI01000037_02965392_02966406 (FAM155A)


Basic Information

Item Value
gene id CI01000037_02965392_02966406
gene name FAM155A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 2965392 ~ 2966433 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_02965392_02966406.mRNA
ATGACCAGGGGTGCTTGGACGTGTCGGCAGCAAGATGACGGCTTAAAAATCTGCTTCGCACCCCGAGAGGACGAAAAGCCATTATTCACCGATTCGGAAAGGGCCCAGAGATGGCGACTGTCCTTAGCCTCTCTTTTGTTTATCACCGTTTTGCTCTCTGATCATCTGTGGTTCTGCGCCGAGGCGAAACTGACGAGGACGCGAGACAAACGGCTGGAGCACACGAATCATATACTTTCATCCAGCCATCAGAGAGAGCAGAGTCTTATTTTTATAGGCAATTCTACCAAACCTCTGTGGAGACTTGAAACTTGTCATCCTGACAGCCTCTCCAAAAACTGCTTGACTTTCGCCGAGGCGGAAGCCGTGTGCTCGGGCCTCTCCGAGTGGAACCTGAGCGATTTCTATCTTTCTTTTTGTAACTCCTACTCGCTTTTGGATTTGTTTTACGGGTTTACGAGTCCGGACAATTTGACCTGTAACCTGGACATGGCTGATGCGTCGGGATGCAGCCAGTGCGTTCAGGCTTACCAACGCTACGACCGACGAGCTCAGGAGAAATACCGAGAGTTTGAGCTTTTGGTACAGAAATATGAAACGGATGTATATTCGGTGCGGACATGCATGGAAGAGTGCACGGTGATTCCTCCCTCAGTTGAAATTATGAAATTATGCAAATCCACTAAAGCGCATAGCCTACTAATGGATGATTCGTGACAGAAATACGAAGTGCTGGGCAAGCTA

Function

symbol description
fam155a Predicted to contribute to stretch-activated, cation-selective, calcium channel activity. Predicted to be involved in calcium ion import across plasma membrane. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human NALF1 (NALCN channel auxiliary factor 1).

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_02965392_02966406.mRNA True 744 mRNA 0.49 2 2965392 2966433

Neighbor

gene id symbol gene type direction distance location
CI01000037_02909777_02910445 NA coding upstream 54903 2909600 ~ 2910489 (+)
CI01000037_02907711_02908412 NA coding upstream 56758 2907063 ~ 2908634 (+)
CI01000037_02755842_02769590 NA coding upstream 194226 2755842 ~ 2771166 (+)
CI01000037_02700254_02707760 GPR89B, GPR89, GPR89A, GPR89B.L coding upstream 256918 2699595 ~ 2708474 (+)
CI01000037_02527352_02576225 TMTOPS2B coding upstream 388688 2526102 ~ 2576704 (+)
CI01000037_03102630_03108094 NA coding downstream 136197 3102630 ~ 3109016 (+)
CI01000037_03120937_03121997 ABHD13 coding downstream 154504 3120937 ~ 3122022 (+)
CI01000037_03126487_03134212 TNFSF13B coding downstream 159590 3126023 ~ 3135221 (+)
CI01000037_03224616_03371497 MYO16 coding downstream 258183 3224616 ~ 3371497 (+)
CI01000037_03716200_03741974 NA coding downstream 749264 3715697 ~ 3743023 (+)
G176361 NA non-coding upstream 102023 2863024 ~ 2863369 (+)
G176357 NA non-coding upstream 112666 2852378 ~ 2852726 (+)
G176355 NA non-coding upstream 115466 2849609 ~ 2849926 (+)
G176328 NA non-coding upstream 139085 2825982 ~ 2826307 (+)
G176323 NA non-coding upstream 142290 2822713 ~ 2823102 (+)
G176466 NA non-coding downstream 503069 3469502 ~ 3469710 (+)
G176472 NA non-coding downstream 511475 3477908 ~ 3478177 (+)
G176475 NA non-coding downstream 516406 3482839 ~ 3483057 (+)
G176494 NA non-coding downstream 538274 3504707 ~ 3504925 (+)
G176501 NA non-coding downstream 568792 3535225 ~ 3535554 (+)
G176346 NA other upstream 125339 2839760 ~ 2840053 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 995001 1965603 ~ 1966435 (+)
G174949 NA other upstream 1351118 1613876 ~ 1614274 (+)
CI01000037_00987906_00988350 NA other upstream 1975633 987859 ~ 989246 (+)
G176377 NA other downstream 10429 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 1246850 4212907 ~ 4218305 (+)

Expression


Co-expression Network