CI01000037_03102630_03108094


Basic Information

Item Value
gene id CI01000037_03102630_03108094
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 3102630 ~ 3109016 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_03102630_03108094.mRNA
ACTGTCTACAAACACTGGCTCTGTGCCCAGTTCTTCCACACCACACAGATGCACTGCAGCAACAGGATCCCCTGCAGGAAGTACTGCCTGGAGGTCCAGCAGAGGTGTCCTTTCATATTGCCTGACAATGATGAACTCATCTATGGTGGAAGCCCCAGTTTTATATGCACAGGGCTCCAAGAGGACAACCCTTCAGACGCAGAGACAGAGTGCTGCGATGTCCGATGGGACAGCAGGGCGGACAACAGCTCCAAAGGCACTCTCAAAAGAACTCACCCGTCGTGTCAGCACGGGACATCCCTGACCTCGTCAGCGGCCTCTAGACTGTGCAACAGCAGACTCAAACTCTGCCTGCTGGTCCTCGTCCTCCTTCATACTGTTGCCACTCTCACTGCATCCCACAATCCCACTGGGTTCAACCTCACCTCCAGCTCCTCCAACGAGGAATGACGGAATAGCCACTCAGTAACAGTGCCGATTCCAGTGACGTGACGGACCGTGGGTAACTTGCTGGTACAGAAACTGTGGACATGCAATCAAAGCAAACCAAGCAAACTGACGAAGCTAAACAAACACTGGACAAATCCAATCAAGCAACAAGAACAAGGGACAACACCGTAGCCTTTGTTGAAAGAGGCTTCTAGGGGGCGGAGTTCTCTCGCACCACGTTTTTTACACTGTGTCAATGGTTTGGATTTCTGTTGCACTAGATGACTACAGGATCTAATTCATGTTTCTTTTCTTTTCATTTGGGTCTTTGTGCAGAAAGGATTGGCAGAGATGGATGAGTTAAATGTACAGTATCCAAGTGAATATTCAAGACTGAGTGCGCGTCTATGTGAGCGAACGGATGAGTGCGTGTGTGCATGTGTGCCTGTGCTTGCATCCGTGTGTCCACTTAGATGTTCTTCTCGTTTCTATTCGTAATCACAAACTCTCTGAATGCTGCTCTATTCATTACGAGGGTTTCTATTGCCGTTTATTCATTGACAAATCTGCCTAGACAAATACCAAGACACCCAACAAAAAGCCCAGGTTCAAACTCAGATTCTCCTGTAACCTTATTAAGGTAGCCTGATGTTTTTGTTGCTTGTATGATGTCATTTCCTGCAAGGTCAGGTCAGTAGCTTTGGGGGTCTGGAAACATTAATGTCACCCAGTTATTTGCTTAAGTGCTTGACTGAAAAGGTCTTTGTTGGGATGTTATGTGGTATCCAGACTTCTGTTATTTTCTCCCCTCAATCTGCAAAAAGACGTCCACAAATCTGTTTTAATGTTATATATTATATTAAGATATTATATTATCTACCCTATATTCTCTAATTGCATGTTAGATCCAGAGTTTAGACTATGCTGCTAAAGTTTTAAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_03102630_03108094.mRNA True 1372 mRNA 0.45 2 3102630 3109016

Neighbor

gene id symbol gene type direction distance location
CI01000037_02965392_02966406 FAM155A coding upstream 136197 2965392 ~ 2966433 (+)
CI01000037_02909777_02910445 NA coding upstream 192141 2909600 ~ 2910489 (+)
CI01000037_02907711_02908412 NA coding upstream 193996 2907063 ~ 2908634 (+)
CI01000037_02755842_02769590 NA coding upstream 331464 2755842 ~ 2771166 (+)
CI01000037_02700254_02707760 GPR89B, GPR89, GPR89A, GPR89B.L coding upstream 394156 2699595 ~ 2708474 (+)
CI01000037_03120937_03121997 ABHD13 coding downstream 11921 3120937 ~ 3122022 (+)
CI01000037_03126487_03134212 TNFSF13B coding downstream 17007 3126023 ~ 3135221 (+)
CI01000037_03224616_03371497 MYO16 coding downstream 115600 3224616 ~ 3371497 (+)
CI01000037_03716200_03741974 NA coding downstream 606681 3715697 ~ 3743023 (+)
CI01000037_03761579_03791584 NA coding downstream 652563 3761579 ~ 3792055 (+)
G176361 NA non-coding upstream 239261 2863024 ~ 2863369 (+)
G176357 NA non-coding upstream 249904 2852378 ~ 2852726 (+)
G176355 NA non-coding upstream 252704 2849609 ~ 2849926 (+)
G176328 NA non-coding upstream 276323 2825982 ~ 2826307 (+)
G176323 NA non-coding upstream 279528 2822713 ~ 2823102 (+)
G176466 NA non-coding downstream 360486 3469502 ~ 3469710 (+)
G176472 NA non-coding downstream 368892 3477908 ~ 3478177 (+)
G176475 NA non-coding downstream 373823 3482839 ~ 3483057 (+)
G176494 NA non-coding downstream 395691 3504707 ~ 3504925 (+)
G176501 NA non-coding downstream 426209 3535225 ~ 3535554 (+)
G176377 NA other upstream 14662 2976862 ~ 3087968 (+)
G176346 NA other upstream 262577 2839760 ~ 2840053 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 1132239 1965603 ~ 1966435 (+)
G174949 NA other upstream 1488356 1613876 ~ 1614274 (+)
CI01000037_04213179_04218057 NA other downstream 1104267 4212907 ~ 4218305 (+)

Expression


Co-expression Network