G174580


Basic Information

Item Value
gene id G174580
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 503746 ~ 503978 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU198274
GAAGTCATAAGTAATATATAAGTGACTCTTATATATTACTTTTTTTTTTTGCATCACTTCCACAAGTCTTCATAAAGGGGGTCAAAATGCCCCTCATGCATTTACTATGTAAATTTTACTCTCTGTGGTGTTTTTTTCCATCGGTTTTGTTGATAATATTCCCTAAAACTCCATGGATTACTCCAAATCTCAGTTTGCGCTTATGTCAATTTCATATTTCATGTTGAAAAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198274 True 233 lncRNA 0.32 1 503746 503978

Neighbor

gene id symbol gene type direction distance location
CI01000037_00406888_00413827 CARF coding upstream 89590 406888 ~ 414156 (+)
CI01000037_00348422_00394107 FAM117BB coding upstream 109639 348422 ~ 394107 (+)
CI01000037_00324040_00344658 BMPR2, BMPR2B coding upstream 158970 322308 ~ 344776 (+)
CI01000037_00296900_00315382 NA coding upstream 188063 296900 ~ 315683 (+)
CI01000037_00237846_00258273 NA coding upstream 244996 236927 ~ 258750 (+)
CI01000037_00578227_00598603 NA coding downstream 74249 578227 ~ 598836 (+)
CI01000037_00606067_00621968 MPP4A coding downstream 102089 606067 ~ 621968 (+)
CI01000037_00625438_00630273 TMEM237A coding downstream 121460 625438 ~ 630310 (+)
CI01000037_00633378_00678193 ABI2, ABI2A coding downstream 129400 633338 ~ 679180 (+)
CI01000037_00687367_00687808 NA coding downstream 183389 687367 ~ 687860 (+)
G174576 NA non-coding upstream 6374 497079 ~ 497372 (+)
G174562 NA non-coding upstream 43198 457883 ~ 460548 (+)
G174551 NA non-coding upstream 81100 418482 ~ 422646 (+)
G174500 NA non-coding upstream 285898 217628 ~ 217848 (+)
G174445 NA non-coding upstream 435085 65818 ~ 68661 (+)
G174633 NA non-coding downstream 201063 705041 ~ 709541 (+)
G174656 NA non-coding downstream 286879 790857 ~ 791140 (+)
G174662 NA non-coding downstream 310112 814090 ~ 814591 (+)
G174663 NA non-coding downstream 310804 814782 ~ 816038 (+)
CI01000037_00228809_00230442 NA other upstream 273350 228809 ~ 230730 (+)
CI01000037_00987906_00988350 NA other downstream 483881 987859 ~ 989246 (+)
G174949 NA other downstream 1109898 1613876 ~ 1614274 (+)
CI01000037_01965864_01966433 COA5, CB064 other downstream 1461764 1965603 ~ 1966435 (+)
G176346 NA other downstream 2335782 2839760 ~ 2840053 (+)

Expression


Co-expression Network