XLOC_000910 (FO681286.1)


Basic Information

Item Value
gene id XLOC_000910
gene name FO681286.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 160302 ~ 206208 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001447
acacacacacacacatgcacattattAttcaacagaagaaagagactcCTGGAGATTTCAAACGTTACTCTGAATTATAATATTTCCAAAATTAACATCTACCCCCTATCCTCACCCTCACAcacacacacacacacacacacacacacacacacacacacacacacacacacAACATTCCCTCAAacacactcaggtggacacacacacactcagTTGAATGCAGTGcaatctgtgtgtgtatgtgtatgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgac
>TCONS_00002895
CACCGGCCTCCATCAGGATCTGGACAGGAGAGAGAAACTGCAGGACCTGGGAGAGCGACTGTACCGAGCAGCGGCGCTAGAGAAAGCACAGAGAGACGGACGGCGGATCTCCATCACTTCAACTCTGGATCTGAAATCTGTCAAACAGCTGATCCTGGATCGATCTACACACCCGAAAATCAGAGGAATCCTGGAGGATCTGCTGCTTTACCAAGCCGGAGATCCTCCAAACCCTGTTTCAGCATCTCAGGAGTCTCCGAGGGTCAGTCCACGGCTCAGCGCGTTCCAGCTGCTCAGATCCAAGTTCCTGAAGAGTTCGCAGAAGCCCGGGGTCAGCCGCAGGAGAGAAGTGGGCTCTCTGAATGTCAAGGAGCGCCAGATTAAAGACACACACACGCTGAGAGCCAACGCAAGAGCTGGAATGAAGAGAAAAGCCTCACGTGTTCAGGACATGCTGGAGAAATTTGCAGCACTGGAGAAAAAGGACATGAAGAAACAGACGCAGCGGTGCAGCGGCGGAGACAGTGCGTTCAGCAGCATCATCAAGGCATT
>TCONS_00001450
GATAAGAGTGTGTTGGTCAGATGATGGTCAgcctctgtcacacacacactgatggagAAGTTCCAGGCGGCGATGGTTCTGGGAGCGGTGGGAGACGCGCTGGGCTCCCGCTGGCAGACCTGCAGCTCGGGCTCTCAGATCCAGCAGGAGCTCCGGGCCCTCGGGGGACTCGCGGCCCTTAAACTGGATGCAGAACACTGGCCACTGAGTGACGGAGCCCTGATGCACATGACCACCGCTGAGGCCCTGATCACTGattACTGGTGTCTGGAGGATCTGTACCGTGAGCTGGTGCGGCTCTATGTGGAGGCCATGGTGAGTCTGCAGGGTCGAGTCCCGGAGCCCAGCACTGTGGAGGGCTGTGCAAACCTCAAACCACACAACTTCCTGCTGGCCTGGCACACACCCTTCAACGAGAAAGGTTCTGGTCACGGAGCCGCCACTAAAGCCATGTGTATAGGGATGCGCTACTGGCAGCCGGAGCGGCTTCACACATTGGTGGAAGTGAGCATCGAGGCAGGCCGAATGACCCACAACCACCCCATAGGGTTTCTGGGCTCTCTCTGCACGGCTCTCTTCGCCTCGTTCGCAGTGCAGGGCCGTCCGCTGGTCAGCTGGGGTCGAGAGCTCCTGAAGACGCTCCCCAAAGCAGAGGAGTACTGCAGGAAGACCATCCGCCACATGGCAGAGTACCAGGAGACGTGGTTCTACTTCGAGGCCAAGTGGCAGTTTTATCTGGAGGAGCGCGGGATTGAAGACGGACAGAGCAAACCCTCCTTTCCTGAGAGATACGACGCAGACGAGACGGACAGGATGTATAAGCGCTGGAGTTCTGAGGGCTGTGCGGGTCGGCGGGGTCACGACGCTCCAATGATCGCGTATGATGCTCTGCTGGCGGCCGGATCCGACTGGGAGGAACTCTGCAGACGCGCTATACTGCAcggaggagagAGCAGTGCTACAGGTCTGATCTCCGGCTGTCTGTTCGGGCTCCTCCATGGCCTCAGTGCGGCCCCCACCGGCCTCCATCAGGATCTGGACAGGAGAGAGAAACTGCAGGACCTGGGAGAGCGACTGTACCGAGCAGCGGCGCTAGAGAAGTAAAGCGACACACGGACACGCGCACGCACATGCGCacgcacatgcgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatgcacattattAGTGTTTCTCTGATCAATCTAATTGACATTATACACGTAAAACAGCTACTCAATCTGTTATTGTTCAACCTAAAGTGCTCTTCATGCTTTTGTAAGTGATGTTTTGGTCATAAATGTAAAGCATCACTGTATATTTAATGAAAACGAGAATCAGACAAGCTGTCAATCATGTGGGAGGCTTTGACCCCAGGGGTGGAGTTTAGAATAGGGGAGTGGTCGAACATATATGGGCGGGACTTGTTTGTGGATTTCAAACGCATGTATTTTGAATATTCATTAAGTAATTAAAGATTGATTTGAAGTCTT

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041010-126 Predicted to enable ADP-ribosylarginine hydrolase activity and magnesium ion binding activity. Predicted to act upstream of or within protein de-ADP-ribosylation. Is expressed in heart; heart rudiment; and heart tube. Orthologous to human ADPRHL1 (ADP-ribosylhydrolase like 1).

Ensembl:

ensembl_id ENSDARG00000041589 ENSDARG00000109848

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001447 False 297 mRNA 0.43 10 160302 201004
TCONS_00002895 False 552 lncRNA 0.55 2 199526 201194
TCONS_00001450 True 1538 mRNA 0.55 8 200294 206208

Neighbor

gene id symbol gene type direction distance location
XLOC_000909 pcid2 coding downstream 2739 152007 ~ 157563 (-)
XLOC_000907 FP067451.1 coding downstream 12456 108285 ~ 147846 (-)
XLOC_000908 NA coding downstream 18183 141289 ~ 142119 (-)
XLOC_000906 gpa33a coding downstream 88779 65705 ~ 71523 (-)
XLOC_000905 si:zfos-1011f11.2 coding downstream 95285 60979 ~ 65017 (-)
XLOC_000912 dcun1d2b coding upstream 1973 208181 ~ 214911 (-)
XLOC_000913 gas6 coding upstream 106576 312784 ~ 338445 (-)
XLOC_000914 pros1 coding upstream 137084 343292 ~ 354166 (-)
XLOC_000915 rasa3 coding upstream 151310 357518 ~ 411331 (-)
XLOC_000916 METTL21C coding upstream 248107 454315 ~ 462165 (-)
XLOC_000927 NA non-coding upstream 572367 778575 ~ 779614 (-)
XLOC_000929 NA non-coding upstream 799729 1005937 ~ 1014866 (-)
XLOC_000930 CU611053.1 non-coding upstream 844733 1050941 ~ 1051057 (-)
XLOC_000931 NA non-coding upstream 937754 1143962 ~ 1253194 (-)
XLOC_000932 NA non-coding upstream 1084967 1291175 ~ 1315753 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_06223295_06227054 ADPRHL1 coding CI01000299 null 6222892 ~ 6227186 (+)
bowfin (Amia calva) AMCG00014431 adprhl1 coding CM030128.1 CM030128.1 13853162 ~ 13864850 (-)