G174742


Basic Information

Item Value
gene id G174742
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 1035450 ~ 1035773 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU198477
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACACACACA
>TU198478
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACACACACA
>TU198479
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACACACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198477 False 242 lncRNA 0.50 2 1035450 1035773
TU198478 False 252 lncRNA 0.50 2 1035450 1035773
TU198479 True 256 lncRNA 0.50 2 1035450 1035773

Neighbor

gene id symbol gene type direction distance location
CI01000037_00987906_00988350 NA coding upstream 47078 987859 ~ 989246 (+)
CI01000037_00874555_00887437 NA coding upstream 147433 874487 ~ 888017 (+)
CI01000037_00808744_00809273 NA coding upstream 225577 808744 ~ 809873 (+)
CI01000037_00796721_00807196 NA coding upstream 228116 795352 ~ 807334 (+)
CI01000037_00784200_00785176 NA coding upstream 250274 783585 ~ 785176 (+)
CI01000037_01075201_01076456 NA coding downstream 38201 1073974 ~ 1076489 (+)
CI01000037_01098540_01104541 NA coding downstream 62299 1098072 ~ 1105186 (+)
CI01000037_01670886_01672687 TBA1A, TUBA1C, TUBA1B.L, TUBA8L3, TUBA4A, TUBA3E.L coding downstream 635113 1670886 ~ 1673145 (+)
CI01000037_01674415_01677266 TBA1A, TUBA1A.S, TUBA8L4, TUBA1A, TUBA8L3, TBA, TUBA4A coding downstream 638320 1674093 ~ 1677407 (+)
CI01000037_01685225_01686624 NA coding downstream 649452 1685225 ~ 1686738 (+)
G174731 NA non-coding upstream 11963 1022442 ~ 1023487 (+)
G174712 NA non-coding upstream 53458 981701 ~ 981992 (+)
G174709 NA non-coding upstream 61162 973973 ~ 974288 (+)
G174676 NA non-coding upstream 183044 852144 ~ 852406 (+)
G174675 NA non-coding upstream 183968 849889 ~ 851482 (+)
G174743 NA non-coding downstream 3305 1039078 ~ 1073857 (+)
G174776 NA non-coding downstream 47667 1083440 ~ 1083737 (+)
G174758 NA non-coding downstream 48315 1084088 ~ 1087438 (+)
G174789 NA non-coding downstream 159302 1195075 ~ 1233465 (+)
G174825 NA non-coding downstream 201928 1237701 ~ 1237939 (+)
CI01000037_00228809_00230442 NA other upstream 805054 228809 ~ 230730 (+)
G174949 NA other downstream 578103 1613876 ~ 1614274 (+)
CI01000037_01965864_01966433 COA5, CB064 other downstream 929969 1965603 ~ 1966435 (+)
G176346 NA other downstream 1803987 2839760 ~ 2840053 (+)
G176377 NA other downstream 1941089 2976862 ~ 3087968 (+)

Expression


Co-expression Network