G174758


Basic Information

Item Value
gene id G174758
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 1084088 ~ 1087438 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU198526
AATTTTAAAGAGTGCATCTATTAGGGCTTCACGATTAATCGAAAGAAATTGTGATGTTATGCCAATGCAAAGGCTGTGATTTAAATCAAAACATGTGCTGCGTTTTATTATACACCGATGTTTATGCGATTTGGTTCATGGTATGCTTCTTCACACAAACTCCATCTCTGAATCTGCTTTGATTTTGGGTCGTTTACTATCTTTCCATATAGTAACAAGAAGTGCTTTTTAACAGAAGAGAAATTTTAAAGTTAGCATGAAATCAAAATTGACAATTCTTTTTTTTTTTTTTGAAAATTTTGAAGCAAATCACAACTATCCAAAGATTCAATCAATTCCTGATGGTCAAAATCAAGTCTCTTGTTCAAGACAACGTTTCAGTCACATTATATATACTTCACAATAGGAAAGAAAAGACAATCACAACTTCCGTTTCATGGCAACTTTAAGTGCTCCATGTGATTTTACGTCAAAATAAAAGTATGTGTGTTGGGGGAGGTGTTATAGATCACTGTTTATTGTTTTTTTTTTTTTTATTACTTATTTTTAATATTTTTATATCTTTTTTTTAGATCAGAATAGAGAGTAGAAATGAAGTGAAGTGGGAGAGTGAGGGAGACAGATTGGAAGGATAAAAAATCTGAGCGCAACCGTTCTGCATGCTGGAGCACTGCCCACTGGCTCCATGTCATTGCATATTGTATATGAAAGCACTTATACTGGACCTTTTATTCAACCTATTCACTGATATCTTTACTATTGCTCCCATACCCATTACATCACTCACTAACTAACCCATGCACACAAACACATACTCAAACTAACCTCACACCATCATTACAACTAAGAAGTGTTTGCCTGTCATTCTTCAAACAGCCCTGGGAGGATTTGAGTATTAGTGAAGAATATAGCCTCTGCATTCCACATACACACAGACACAGTTTCACAATCAAGCTCACACAAATCACACACACACAGATCCCAATATAATTCCATTTAAATCCTCATTGCTTTTGTGCTCTTTTGCAAGGAAGCATAATAGTCACATTATTGGCTAAAGGATCTTTGATGTGTGGACGGAGGGCTCAGTGAATGGATTCAGGAACAATCAGTGTGGTGAGCAGGGAACCTGGGGAGGTTCTCAATCCACGCTTTGATGTCCCTCTATTAGTTTTGAGAAGTGTGTGTGTGTGTGTGTGTGTATGGGTAGTGTTGATAGTGGTTTCCATAGTAATGCTGGGAATGGAAATCATTTAAGTTTTCAAAAACACGCAACCAAAAAATATAAAAACAGGAATAATTCACTTGAAAATTGTGCTCCTCTTTTCTGTATAATGAAAAAAAGTGATCCAAAATGATAAATAGTTATTCCTCACATAAAGCTGTAGAAGACATGGAACATGGTCTTCTTTTATTATATACTTTAATTTTACTTTGTGCCCTTTTTGAAACTTTAAAGTTTCAGTTCATTGTAACTGTATGGAAAAATACAACCAACTACACTATCTTTTTATCCTTTTGTGTTCAATGGATGAAAGTCATTCAGGCATTCAGGTCTGGAATGATATGAAGGTGAGTAAAAGGAAAATATATAAATATTTTTATTTTTGGGTGAATTAATCCTTTAATAAGATCAAAACCACCAACCCTTCAATATGCAAACCATAAATAAATATAATCCCTGGTTTTGAGCCATGAAAACAGTCTCTGTGTTTGCTGCAAATTCAAATAAAAAGCAAAAGATAGGAAACATTAGACACAGATGCAAGAACTCCAGTATTGTTTGTCATGAAAGTGAAAGTAAAGCTCATTTTCCATAAGAAAAGGTGGCAGTAGAGAGGGAAGTACTTGACAGGTAGCTGATACACCAACTGAAAGAGGTCTGATTTATTTGAAGGAGGGAATGAGAGCTTGATGAGCTCAGGAAACCAACAGCAGACAGTAATTCCACCCCGTCTTTGTCTTTCACCGCACCGTCCGAACAAGCTTCTCAAAATGGCACAATAGATTTAATGAAGCGCCTTTGCACACTCTAACTCTATTCCTTTATGGCATAAGCAACACCACAAGTTTTATAACAGCGCTGTAAAAGGCAGACAAAAGACAAATGGCCGTCGATAAATTACTGCGGTCCTGTGGGCTGAGACTGGGTACTGTAAAGTGGAGGGGGGTTATGAACAGAGCAGGAGAGGGAGGGGTGGCTTATTTTGTCAGGCAAACCCCAAAAGAAGATGACAGCAGCCGAATCCAAGAGTGCCCCCCTCCTCACTTCAAAAGCACACATGCACACACATGGCTTTCAAACTCCATCAGCTTTAATGAGTCCTGATTGGATAGCATGTCGAAGCTTTTCGGGTCAAACATCAGTCTATCTTCCCATCTTTCTCTCTCTCTGAGCTTCATTACTCTCATCAAGGCAGAATTCAGTGGAACGGCATCTCCAGGCATCTCTTCTAAAAAGAGTTATCAGAGTGTGAAATAACGGTGCAGATGCCCAAATACAGTGTTTTGACAGTACTGCCCAAAGTGATGTTTTGGGTTTCAGCATTAACTGGAATTTGAAATGGACTGCCAGAGGAAAATGTTATTGCTCAGAGGCTGCTATTGAGACTTAATGGACTTCTTAGTTGTGTTTGATTTAAGTACTAACTTATTCTAAGATGTTTCTCTTTAAAAGAAGGGGGGGGATCTCATGTTAATCTTGAGTACATGTAGAGTAGTATAGCATCCTTCATATTTCCGAAAAGTCTTTAGTTTTATCATATTTATAAAAGATAGATACGCGAGTCTTTCCGAAAAAAGCCAAGCTCCTGGAGGCGTGCCTGCCGTCAGTGCCGTTGGCAGAGCTAAAGAGTCACGAGCGTGCGCAGCTTTTGCGTAGAGATCGTCTGCAAGCTGTGACATCAAAATAAAAATGGAACAAAACGTTGGAACGTTTGTGTTGTTTACATTTTATGCACTTGCGCGCCGATTGACAACAAAACACAGACATCTTATGCAGCTTTACTCACCACCCGCGATCTGCAAATCCATCACCGAACTGGGACTTGTTTACAAAGCATTCATCACCGAAATCCCGGGAACAAACAAACATATGTGCACAACTCCGTTGCTGCCCCGGAAAAACAAACTTCATCCACTGTTCCCTTAACGCTGTGTTCTTTGGGAAGCTGAAAAAGGTAATCTTTCCCTCACAACCAAAAACACACTCCTTTGTTGACAGGAGCTGCATCTCATTTTGGAGGCTGCGTCCTCCGGAGGTCACATTTGAAGGCTGCATACATCATCAAGGATGTCATATTTAAGAAAGTAACCGTAATAAAATTGACTGATATTCATTGTGAGGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198526 True 3351 lncRNA 0.39 1 1084088 1087438

Neighbor

gene id symbol gene type direction distance location
CI01000037_01075201_01076456 NA coding upstream 7599 1073974 ~ 1076489 (+)
CI01000037_00987906_00988350 NA coding upstream 95716 987859 ~ 989246 (+)
CI01000037_00874555_00887437 NA coding upstream 196071 874487 ~ 888017 (+)
CI01000037_00808744_00809273 NA coding upstream 274215 808744 ~ 809873 (+)
CI01000037_00796721_00807196 NA coding upstream 276754 795352 ~ 807334 (+)
CI01000037_01098540_01104541 NA coding downstream 10634 1098072 ~ 1105186 (+)
CI01000037_01670886_01672687 TBA1A, TUBA1C, TUBA1B.L, TUBA8L3, TUBA4A, TUBA3E.L coding downstream 583448 1670886 ~ 1673145 (+)
CI01000037_01674415_01677266 TBA1A, TUBA1A.S, TUBA8L4, TUBA1A, TUBA8L3, TBA, TUBA4A coding downstream 586655 1674093 ~ 1677407 (+)
CI01000037_01685225_01686624 NA coding downstream 597787 1685225 ~ 1686738 (+)
CI01000037_01690717_01697406 DNAJB2 coding downstream 603279 1690717 ~ 1697794 (+)
G174776 NA non-coding upstream 351 1083440 ~ 1083737 (+)
G174743 NA non-coding upstream 10231 1039078 ~ 1073857 (+)
G174742 NA non-coding upstream 48315 1035450 ~ 1035773 (+)
G174731 NA non-coding upstream 60601 1022442 ~ 1023487 (+)
G174712 NA non-coding upstream 102096 981701 ~ 981992 (+)
G174789 NA non-coding downstream 107637 1195075 ~ 1233465 (+)
G174825 NA non-coding downstream 150263 1237701 ~ 1237939 (+)
G174826 NA non-coding downstream 151465 1238903 ~ 1239199 (+)
G174828 NA non-coding downstream 154359 1241797 ~ 1284983 (+)
G174900 NA non-coding downstream 308909 1396347 ~ 1458652 (+)
CI01000037_00228809_00230442 NA other upstream 853692 228809 ~ 230730 (+)
G174949 NA other downstream 526438 1613876 ~ 1614274 (+)
CI01000037_01965864_01966433 COA5, CB064 other downstream 878304 1965603 ~ 1966435 (+)
G176346 NA other downstream 1752322 2839760 ~ 2840053 (+)
G176377 NA other downstream 1889424 2976862 ~ 3087968 (+)

Expression


Co-expression Network