G174826


Basic Information

Item Value
gene id G174826
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 1238903 ~ 1239199 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU198599
ATTAACATTTGCTGCATACATTTAAGCAGTTAATAGCATTAGCTAACTGCTGCAAGTGGCAACACAAGACTAAACATCATCATTGAAAATACTGTCAAAACTCAGCAATCCTGAACATCACACTTTCTGTAACTAACTCTTTGTTCTCGGCTATAGGAAAAACAAACTTTTTAAAAATTGATTTTCAAGGACAACAACAAGATTTTCCAGGACATTTTACATTTTCTCTAATTTTCCATGTGTTTTCCAGGACTGGAAAGTTTGTCATCAATTTTCCAGGACGAGTGGGAACCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198599 True 297 lncRNA 0.35 1 1238903 1239199

Neighbor

gene id symbol gene type direction distance location
CI01000037_01098540_01104541 NA coding upstream 133717 1098072 ~ 1105186 (+)
CI01000037_01075201_01076456 NA coding upstream 162414 1073974 ~ 1076489 (+)
CI01000037_00987906_00988350 NA coding upstream 250531 987859 ~ 989246 (+)
CI01000037_00874555_00887437 NA coding upstream 350886 874487 ~ 888017 (+)
CI01000037_00808744_00809273 NA coding upstream 429030 808744 ~ 809873 (+)
CI01000037_01670886_01672687 TBA1A, TUBA1C, TUBA1B.L, TUBA8L3, TUBA4A, TUBA3E.L coding downstream 431687 1670886 ~ 1673145 (+)
CI01000037_01674415_01677266 TBA1A, TUBA1A.S, TUBA8L4, TUBA1A, TUBA8L3, TBA, TUBA4A coding downstream 434894 1674093 ~ 1677407 (+)
CI01000037_01685225_01686624 NA coding downstream 446026 1685225 ~ 1686738 (+)
CI01000037_01690717_01697406 DNAJB2 coding downstream 451518 1690717 ~ 1697794 (+)
CI01000037_01739245_01747048 DES, DESMA coding downstream 499949 1739148 ~ 1747380 (+)
G174825 NA non-coding upstream 964 1237701 ~ 1237939 (+)
G174789 NA non-coding upstream 5438 1195075 ~ 1233465 (+)
G174758 NA non-coding upstream 151465 1084088 ~ 1087438 (+)
G174776 NA non-coding upstream 155166 1083440 ~ 1083737 (+)
G174743 NA non-coding upstream 165046 1039078 ~ 1073857 (+)
G174828 NA non-coding downstream 2598 1241797 ~ 1284983 (+)
G174900 NA non-coding downstream 157148 1396347 ~ 1458652 (+)
G174916 NA non-coding downstream 330718 1569917 ~ 1570479 (+)
G174949 NA non-coding downstream 374677 1613876 ~ 1614274 (+)
G175003 NA non-coding downstream 512615 1751814 ~ 1755182 (+)
CI01000037_00228809_00230442 NA other upstream 1008507 228809 ~ 230730 (+)
CI01000037_01965864_01966433 COA5, CB064 other downstream 726543 1965603 ~ 1966435 (+)
G176346 NA other downstream 1600561 2839760 ~ 2840053 (+)
G176377 NA other downstream 1737663 2976862 ~ 3087968 (+)

Expression


Co-expression Network