G175689


Basic Information

Item Value
gene id G175689
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 2139589 ~ 2139812 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU199572
GGTGAATATTCTGAAATTGGGGAGCGGGCGCTACATTTATATGCTTTTCTAGATTTCTCTCACGGAAGCATACATTCAGGCCTACCAGAGTTGATATCTGTCTTAATACCTCAGATCAGTGCGGTTCTTTAATTTCACCTCACATTAGTTTGTTTGTCTTCCTGTTCGATCAGTAGACATACATCTCCTCCCTGTCTGTCCGAAACGCTCCCTGAACAAGACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199572 True 224 lncRNA 0.44 1 2139589 2139812

Neighbor

gene id symbol gene type direction distance location
CI01000037_02087502_02094770 NA coding upstream 44521 2087502 ~ 2095068 (+)
CI01000037_02065346_02075634 NA coding upstream 63305 2065276 ~ 2076284 (+)
CI01000037_01965864_01966433 COA5, CB064 coding upstream 173154 1965603 ~ 1966435 (+)
CI01000037_01925100_01960498 MGAT4A coding upstream 178867 1925100 ~ 1960722 (+)
CI01000037_01890963_01896442 CREG2 coding upstream 243145 1890963 ~ 1896444 (+)
CI01000037_02248789_02250329 POU3F3 coding downstream 108782 2248594 ~ 2251121 (+)
CI01000037_02279319_02280446 GPR45 coding downstream 139346 2279158 ~ 2280756 (+)
CI01000037_02282458_02287205 NA coding downstream 141535 2281347 ~ 2287285 (+)
CI01000037_02334480_02338932 NA coding downstream 191652 2331464 ~ 2338989 (+)
CI01000037_02378066_02392175 NCK2A, NCK2 coding downstream 238254 2378066 ~ 2392871 (+)
G175674 NA non-coding upstream 65949 2073428 ~ 2073640 (+)
G175670 NA non-coding upstream 75053 2064172 ~ 2064536 (+)
G175641 NA non-coding upstream 79510 2031546 ~ 2060079 (+)
G175004 NA non-coding upstream 358720 1762794 ~ 1780869 (+)
G175003 NA non-coding upstream 384407 1751814 ~ 1755182 (+)
G175693 NA non-coding downstream 3139 2142951 ~ 2143263 (+)
G175628 NA non-coding downstream 4250 2144062 ~ 2295856 (+)
G175630 NA non-coding downstream 158515 2298327 ~ 2300350 (+)
G175767 NA non-coding downstream 162925 2302737 ~ 2303537 (+)
G175769 NA non-coding downstream 172395 2312207 ~ 2312711 (+)
G174949 NA other upstream 525315 1613876 ~ 1614274 (+)
CI01000037_00987906_00988350 NA other upstream 1149830 987859 ~ 989246 (+)
CI01000037_00228809_00230442 NA other upstream 1909193 228809 ~ 230730 (+)
G176346 NA other downstream 699948 2839760 ~ 2840053 (+)
G176377 NA other downstream 837050 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 2073471 4212907 ~ 4218305 (+)

Expression


Co-expression Network