Gene
RNA
| Item | Value |
|---|---|
| gene id | G175628 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000037 |
| NCBI id | null |
| chromosome length | 4612320 |
| location | 2144062 ~ 2295856 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU199498 | False | 1378 | lncRNA | 0.39 | 4 | 2144062 | 2295856 |
| TU199495 | True | 1149 | lncRNA | 0.39 | 2 | 2292902 | 2294251 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000037_02087502_02094770 | NA | coding | upstream | 48994 | 2087502 ~ 2095068 (+) |
| CI01000037_02065346_02075634 | NA | coding | upstream | 67778 | 2065276 ~ 2076284 (+) |
| CI01000037_01965864_01966433 | COA5, CB064 | coding | upstream | 177627 | 1965603 ~ 1966435 (+) |
| CI01000037_01925100_01960498 | MGAT4A | coding | upstream | 183340 | 1925100 ~ 1960722 (+) |
| CI01000037_01890963_01896442 | CREG2 | coding | upstream | 247618 | 1890963 ~ 1896444 (+) |
| CI01000037_02334480_02338932 | NA | coding | downstream | 35608 | 2331464 ~ 2338989 (+) |
| CI01000037_02378066_02392175 | NCK2A, NCK2 | coding | downstream | 82210 | 2378066 ~ 2392871 (+) |
| CI01000037_02405252_02406221 | NA | coding | downstream | 108927 | 2404783 ~ 2406437 (+) |
| CI01000037_02414352_02418569 | C6H2ORF40, ECRG4A | coding | downstream | 118496 | 2414352 ~ 2418752 (+) |
| CI01000037_02527352_02576225 | TMTOPS2B | coding | downstream | 230246 | 2526102 ~ 2576704 (+) |
| G175693 | NA | non-coding | upstream | 799 | 2142951 ~ 2143263 (+) |
| G175689 | NA | non-coding | upstream | 4250 | 2139589 ~ 2139812 (+) |
| G175674 | NA | non-coding | upstream | 70422 | 2073428 ~ 2073640 (+) |
| G175670 | NA | non-coding | upstream | 79526 | 2064172 ~ 2064536 (+) |
| G175641 | NA | non-coding | upstream | 83983 | 2031546 ~ 2060079 (+) |
| G175630 | NA | non-coding | downstream | 2471 | 2298327 ~ 2300350 (+) |
| G175767 | NA | non-coding | downstream | 6881 | 2302737 ~ 2303537 (+) |
| G175769 | NA | non-coding | downstream | 16351 | 2312207 ~ 2312711 (+) |
| G175777 | NA | non-coding | downstream | 117045 | 2412901 ~ 2413354 (+) |
| G175858 | NA | non-coding | downstream | 310522 | 2606378 ~ 2609995 (+) |
| G174949 | NA | other | upstream | 529788 | 1613876 ~ 1614274 (+) |
| CI01000037_00987906_00988350 | NA | other | upstream | 1154303 | 987859 ~ 989246 (+) |
| CI01000037_00228809_00230442 | NA | other | upstream | 1913666 | 228809 ~ 230730 (+) |
| G176346 | NA | other | downstream | 543904 | 2839760 ~ 2840053 (+) |
| G176377 | NA | other | downstream | 681006 | 2976862 ~ 3087968 (+) |
| CI01000037_04213179_04218057 | NA | other | downstream | 1917427 | 4212907 ~ 4218305 (+) |
