G175769


Basic Information

Item Value
gene id G175769
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 2312207 ~ 2312711 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU199654
AACGTTGGCTGTGTCCGAAATCACCCCCTATACCCTTAAATAGGGTACTATTTAAGGGGACAGCCATTTGTAGTGATGTCTGAAACCATAGTGGACATTATCGAGTGAACTCATTCAATCCCACAATGCACCACAATAATGAGTGTACAACTGATGTACGCTCAATGGCTAGATAATACCCATAATGCACTGTGAGAGTCACGCACCAAATGAATTCCCACATCTGACCTTGAAGATGCCGCCCGCAGATGAATCCACCATCCATTTTCCAAACTGCCTGTCCAATGTGGTTACAGCGTGTCATACAGGTATAAATTTCTTTTTAGTTGATTATTAAATTGTTTAATTAAGGTTTATACATAGTTTCCATGACAGAGTTCAAGATAAATCTTTTCATCTTACTACTGGAGCTGCCAGTTTGCTACATTTCAAATAATTATTAAACAGCAAGCACAAACTATGCAAAAGTGGCAGCCCTTCTGGCATACTCAGTGTCCGAATTCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199654 True 505 lncRNA 0.40 1 2312207 2312711

Neighbor

gene id symbol gene type direction distance location
CI01000037_02282458_02287205 NA coding upstream 24922 2281347 ~ 2287285 (+)
CI01000037_02279319_02280446 GPR45 coding upstream 31451 2279158 ~ 2280756 (+)
CI01000037_02248789_02250329 POU3F3 coding upstream 61086 2248594 ~ 2251121 (+)
CI01000037_02087502_02094770 NA coding upstream 217139 2087502 ~ 2095068 (+)
CI01000037_02065346_02075634 NA coding upstream 235923 2065276 ~ 2076284 (+)
CI01000037_02334480_02338932 NA coding downstream 18753 2331464 ~ 2338989 (+)
CI01000037_02378066_02392175 NCK2A, NCK2 coding downstream 65355 2378066 ~ 2392871 (+)
CI01000037_02405252_02406221 NA coding downstream 92072 2404783 ~ 2406437 (+)
CI01000037_02414352_02418569 C6H2ORF40, ECRG4A coding downstream 101641 2414352 ~ 2418752 (+)
CI01000037_02527352_02576225 TMTOPS2B coding downstream 213391 2526102 ~ 2576704 (+)
G175767 NA non-coding upstream 8670 2302737 ~ 2303537 (+)
G175630 NA non-coding upstream 11857 2298327 ~ 2300350 (+)
G175628 NA non-coding upstream 16351 2144062 ~ 2295856 (+)
G175693 NA non-coding upstream 168944 2142951 ~ 2143263 (+)
G175689 NA non-coding upstream 172395 2139589 ~ 2139812 (+)
G175777 NA non-coding downstream 100190 2412901 ~ 2413354 (+)
G175858 NA non-coding downstream 293667 2606378 ~ 2609995 (+)
G175871 NA non-coding downstream 312693 2625404 ~ 2626599 (+)
G175875 NA non-coding downstream 323384 2636095 ~ 2636309 (+)
G175877 NA non-coding downstream 333128 2645839 ~ 2646168 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 341816 1965603 ~ 1966435 (+)
G174949 NA other upstream 697933 1613876 ~ 1614274 (+)
CI01000037_00987906_00988350 NA other upstream 1322448 987859 ~ 989246 (+)
CI01000037_00228809_00230442 NA other upstream 2081811 228809 ~ 230730 (+)
G176346 NA other downstream 527049 2839760 ~ 2840053 (+)
G176377 NA other downstream 664151 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 1900572 4212907 ~ 4218305 (+)

Expression


Co-expression Network