G176273


Basic Information

Item Value
gene id G176273
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 2786861 ~ 2787562 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU200241
ATTTTTCCTATTTAAAACTTGACTCTTCTGTAGTTACATCGTGTACTAAGACCGACGGAAAATGAAAAGTTGTGATTTTCTAGGCCGATATGGCTAGGAACTATACTCTCATTCTGGCGTAATATCATTGCGCCTGCTGCAGCCATGGTACGGCAGCAAAGTTCCTTGATTATTACGCCAGAATGAGAGTATAGTTCCTAGCCATATCGGCCTAGAAAATCACAACTTTTCATTTTCCGTCGGTCTTAGTACACGATGTAACTACAGAAGAGTCAAGTTTTAAATAGGAAAAATATTGAAACTCTTTGGTCATTTTTTAACGAGATGCTAACGGTCTAATCAGATTCAATGAACTATGCTAAGCTATGCTAAAAGTGGTACCGCCAGACCCGGAGATCGGCTGAATGGATTCGAAAACGGTAAAACTCAACTGTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200241 True 437 lncRNA 0.39 2 2786861 2787562

Neighbor

gene id symbol gene type direction distance location
CI01000037_02755842_02769590 NA coding upstream 15695 2755842 ~ 2771166 (+)
CI01000037_02700254_02707760 GPR89B, GPR89, GPR89A, GPR89B.L coding upstream 78387 2699595 ~ 2708474 (+)
CI01000037_02527352_02576225 TMTOPS2B coding upstream 210157 2526102 ~ 2576704 (+)
CI01000037_02414352_02418569 C6H2ORF40, ECRG4A coding upstream 368109 2414352 ~ 2418752 (+)
CI01000037_02405252_02406221 NA coding upstream 380424 2404783 ~ 2406437 (+)
CI01000037_02907711_02908412 NA coding downstream 119501 2907063 ~ 2908634 (+)
CI01000037_02909777_02910445 NA coding downstream 122038 2909600 ~ 2910489 (+)
CI01000037_02965392_02966406 FAM155A coding downstream 177830 2965392 ~ 2966433 (+)
CI01000037_03102630_03108094 NA coding downstream 315068 3102630 ~ 3109016 (+)
CI01000037_03120937_03121997 ABHD13 coding downstream 333375 3120937 ~ 3122022 (+)
G175849 NA non-coding upstream 65891 2715672 ~ 2720970 (+)
G175850 NA non-coding upstream 71350 2669506 ~ 2715511 (+)
G175887 NA non-coding upstream 95772 2690351 ~ 2691089 (+)
G175877 NA non-coding upstream 140693 2645839 ~ 2646168 (+)
G175875 NA non-coding upstream 150552 2636095 ~ 2636309 (+)
G176292 NA non-coding downstream 9839 2797401 ~ 2798084 (+)
G176294 NA non-coding downstream 10650 2798212 ~ 2798493 (+)
G176297 NA non-coding downstream 11747 2799309 ~ 2799606 (+)
G176303 NA non-coding downstream 17761 2805323 ~ 2805550 (+)
G176323 NA non-coding downstream 35151 2822713 ~ 2823102 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 816470 1965603 ~ 1966435 (+)
G174949 NA other upstream 1172587 1613876 ~ 1614274 (+)
CI01000037_00987906_00988350 NA other upstream 1797102 987859 ~ 989246 (+)
CI01000037_00228809_00230442 NA other upstream 2556465 228809 ~ 230730 (+)
G176346 NA other downstream 52198 2839760 ~ 2840053 (+)
G176377 NA other downstream 189300 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 1425721 4212907 ~ 4218305 (+)

Expression


Co-expression Network