G176361


Basic Information

Item Value
gene id G176361
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 2863024 ~ 2863369 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU200333
GATTCAATGATAGCAGAGTAAAACTGTTTCAGCAGCTCCTGTGGTAGGTTGAACTTCCTCAGCTGGCAAAGGAAGTACAACCTCTGCTGGGCCTTTTTCACAATGGACTCAATGTGGTTGTCCCACTTCAGGTCCTGGGAGATTGTGGTGCCCAGGAACCTGAATGACTCCACTGCAGTCACAGTGCTGTTCATGATGGTGAGTGGGGGGAGAGCAGGGGGGTTTCTCCTGAAGTCCACGATCATCTCCACTGTCTTGAGCATGTTGAGCTCCAGGTTGTTAAGACTGCACCAGACAGCCAGCTGTTCAACCTCCAGTCTGTAAGCAGACTCGTCACCATCCTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200333 True 346 lncRNA 0.51 1 2863024 2863369

Neighbor

gene id symbol gene type direction distance location
CI01000037_02755842_02769590 NA coding upstream 91858 2755842 ~ 2771166 (+)
CI01000037_02700254_02707760 GPR89B, GPR89, GPR89A, GPR89B.L coding upstream 154550 2699595 ~ 2708474 (+)
CI01000037_02527352_02576225 TMTOPS2B coding upstream 286320 2526102 ~ 2576704 (+)
CI01000037_02414352_02418569 C6H2ORF40, ECRG4A coding upstream 444272 2414352 ~ 2418752 (+)
CI01000037_02405252_02406221 NA coding upstream 456587 2404783 ~ 2406437 (+)
CI01000037_02907711_02908412 NA coding downstream 43694 2907063 ~ 2908634 (+)
CI01000037_02909777_02910445 NA coding downstream 46231 2909600 ~ 2910489 (+)
CI01000037_02965392_02966406 FAM155A coding downstream 102023 2965392 ~ 2966433 (+)
CI01000037_03102630_03108094 NA coding downstream 239261 3102630 ~ 3109016 (+)
CI01000037_03120937_03121997 ABHD13 coding downstream 257568 3120937 ~ 3122022 (+)
G176357 NA non-coding upstream 10298 2852378 ~ 2852726 (+)
G176355 NA non-coding upstream 13098 2849609 ~ 2849926 (+)
G176328 NA non-coding upstream 36717 2825982 ~ 2826307 (+)
G176323 NA non-coding upstream 39922 2822713 ~ 2823102 (+)
G176303 NA non-coding upstream 57474 2805323 ~ 2805550 (+)
G176466 NA non-coding downstream 606133 3469502 ~ 3469710 (+)
G176472 NA non-coding downstream 614539 3477908 ~ 3478177 (+)
G176475 NA non-coding downstream 619470 3482839 ~ 3483057 (+)
G176494 NA non-coding downstream 641338 3504707 ~ 3504925 (+)
G176501 NA non-coding downstream 671856 3535225 ~ 3535554 (+)
G176346 NA other upstream 22971 2839760 ~ 2840053 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 892633 1965603 ~ 1966435 (+)
G174949 NA other upstream 1248750 1613876 ~ 1614274 (+)
CI01000037_00987906_00988350 NA other upstream 1873265 987859 ~ 989246 (+)
G176377 NA other downstream 113493 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 1349914 4212907 ~ 4218305 (+)

Expression


Co-expression Network