G176472



Basic Information


Item Value
gene id G176472
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 3477908 ~ 3478177 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU200448
TTATGATTAAAGTTAGTAAAGTTAATAGAGTAGATAATTTGATAGGACGAATTAATAATATATTTAGAAAAATTAAGGATATGGGTTTATATAAGATTAAAACAAAATGGGAAATTGAATTAGATAATAAAATAACAGAAGGAGATTGGAAACAAAGTTTAAAAGAAAATTTAAGAACTACGCAATCTCCATATTGGCAAGAATATGCTTGGAAAATGATTATGTGATATTTTATAACACCAGAAATATCTTCTAAATATAATCATTTAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU200448 True 270 lncRNA 0.23 1 3477908 3478177

Neighbor


gene id symbol gene type direction distance location
CI01000037_03224616_03371497 MYO16 coding upstream 106411 3224616 ~ 3371497 (+)
CI01000037_03126487_03134212 TNFSF13B coding upstream 342687 3126023 ~ 3135221 (+)
CI01000037_03120937_03121997 ABHD13 coding upstream 355886 3120937 ~ 3122022 (+)
CI01000037_03102630_03108094 NA coding upstream 368892 3102630 ~ 3109016 (+)
CI01000037_02965392_02966406 FAM155A coding upstream 511475 2965392 ~ 2966433 (+)
CI01000037_03716200_03741974 NA coding downstream 237520 3715697 ~ 3743023 (+)
CI01000037_03761579_03791584 NA coding downstream 283402 3761579 ~ 3792055 (+)
CI01000037_03804670_03806154 NA coding downstream 325800 3803977 ~ 3806468 (+)
CI01000037_03811261_03823037 CARKD coding downstream 333084 3811261 ~ 3823115 (+)
CI01000037_03824405_03854894 ANKRD10B coding downstream 346031 3824208 ~ 3855194 (+)
G176466 NA non-coding upstream 8198 3469502 ~ 3469710 (+)
G176361 NA non-coding upstream 614539 2863024 ~ 2863369 (+)
G176357 NA non-coding upstream 625182 2852378 ~ 2852726 (+)
G176355 NA non-coding upstream 627982 2849609 ~ 2849926 (+)
G176328 NA non-coding upstream 651601 2825982 ~ 2826307 (+)
G176475 NA non-coding downstream 4662 3482839 ~ 3483057 (+)
G176494 NA non-coding downstream 26530 3504707 ~ 3504925 (+)
G176501 NA non-coding downstream 57048 3535225 ~ 3535554 (+)
G176502 NA non-coding downstream 57746 3535923 ~ 3536286 (+)
G176503 NA non-coding downstream 58393 3536570 ~ 3537026 (+)
G176377 NA other upstream 389940 2976862 ~ 3087968 (+)
G176346 NA other upstream 637855 2839760 ~ 2840053 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 1507517 1965603 ~ 1966435 (+)
G174949 NA other upstream 1863634 1613876 ~ 1614274 (+)
CI01000037_04213179_04218057 NA other downstream 735106 4212907 ~ 4218305 (+)

Expression



Co-expression Network