G176475


Basic Information

Item Value
gene id G176475
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 3482839 ~ 3483057 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU200451
CATGTTGGGAGATCTTTTCGCATACTAACCAATGGTGGAAATGGCCAAGATTCACAGGGGGAACCCTAGTTGGGGACATATTTTATATTTTCAAACAATAGATGCAGAAAATCCCATATTTATATATGGAATTTGCATAGCGTTTGGAGGCTATTATATGGTGGAAATTCGTAATCTGGACTCAGTCCCGCCGAGTCACACCCCCTGTTTTCAGCCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200451 True 219 lncRNA 0.42 1 3482839 3483057

Neighbor

gene id symbol gene type direction distance location
CI01000037_03224616_03371497 MYO16 coding upstream 111342 3224616 ~ 3371497 (+)
CI01000037_03126487_03134212 TNFSF13B coding upstream 347618 3126023 ~ 3135221 (+)
CI01000037_03120937_03121997 ABHD13 coding upstream 360817 3120937 ~ 3122022 (+)
CI01000037_03102630_03108094 NA coding upstream 373823 3102630 ~ 3109016 (+)
CI01000037_02965392_02966406 FAM155A coding upstream 516406 2965392 ~ 2966433 (+)
CI01000037_03716200_03741974 NA coding downstream 232640 3715697 ~ 3743023 (+)
CI01000037_03761579_03791584 NA coding downstream 278522 3761579 ~ 3792055 (+)
CI01000037_03804670_03806154 NA coding downstream 320920 3803977 ~ 3806468 (+)
CI01000037_03811261_03823037 CARKD coding downstream 328204 3811261 ~ 3823115 (+)
CI01000037_03824405_03854894 ANKRD10B coding downstream 341151 3824208 ~ 3855194 (+)
G176472 NA non-coding upstream 4662 3477908 ~ 3478177 (+)
G176466 NA non-coding upstream 13129 3469502 ~ 3469710 (+)
G176361 NA non-coding upstream 619470 2863024 ~ 2863369 (+)
G176357 NA non-coding upstream 630113 2852378 ~ 2852726 (+)
G176355 NA non-coding upstream 632913 2849609 ~ 2849926 (+)
G176494 NA non-coding downstream 21650 3504707 ~ 3504925 (+)
G176501 NA non-coding downstream 52168 3535225 ~ 3535554 (+)
G176502 NA non-coding downstream 52866 3535923 ~ 3536286 (+)
G176503 NA non-coding downstream 53513 3536570 ~ 3537026 (+)
G176507 NA non-coding downstream 57668 3540725 ~ 3541052 (+)
G176377 NA other upstream 394871 2976862 ~ 3087968 (+)
G176346 NA other upstream 642786 2839760 ~ 2840053 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 1512448 1965603 ~ 1966435 (+)
G174949 NA other upstream 1868565 1613876 ~ 1614274 (+)
CI01000037_04213179_04218057 NA other downstream 730226 4212907 ~ 4218305 (+)

Expression


Co-expression Network