G176501


Basic Information

Item Value
gene id G176501
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 3535225 ~ 3535554 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU200477
TAAAGACCCCCTGTGGTGAAAATCAAGTTTTTAATGTTGTTTGTTGTCTATGTAGTGTTTTTAATATGCTTTAAGACAAACCATGTGCAAATTCATGAGTCAGCACCATTGCTGAGTATTTTATGTTTGAAACTGCAGTAAACCAAAGACAGTCTAATGCCGCGTTCCAGGCAACCCGTAACCCGTGTTTTTCCAACCTTCTACCCGTGAAAGTGCACTGGAACGGCAGTCAAACCCGTGACTTCCCACCCGTGAACTCGTACTAGATCGATGTACTCCCAGTTCCGCGCTCTGACGTCACATAGCCCGCGAAACAACAATGGCAGCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200477 True 330 lncRNA 0.46 1 3535225 3535554

Neighbor

gene id symbol gene type direction distance location
CI01000037_03224616_03371497 MYO16 coding upstream 163728 3224616 ~ 3371497 (+)
CI01000037_03126487_03134212 TNFSF13B coding upstream 400004 3126023 ~ 3135221 (+)
CI01000037_03120937_03121997 ABHD13 coding upstream 413203 3120937 ~ 3122022 (+)
CI01000037_03102630_03108094 NA coding upstream 426209 3102630 ~ 3109016 (+)
CI01000037_02965392_02966406 FAM155A coding upstream 568792 2965392 ~ 2966433 (+)
CI01000037_03716200_03741974 NA coding downstream 180143 3715697 ~ 3743023 (+)
CI01000037_03761579_03791584 NA coding downstream 226025 3761579 ~ 3792055 (+)
CI01000037_03804670_03806154 NA coding downstream 268423 3803977 ~ 3806468 (+)
CI01000037_03811261_03823037 CARKD coding downstream 275707 3811261 ~ 3823115 (+)
CI01000037_03824405_03854894 ANKRD10B coding downstream 288654 3824208 ~ 3855194 (+)
G176494 NA non-coding upstream 30300 3504707 ~ 3504925 (+)
G176475 NA non-coding upstream 52168 3482839 ~ 3483057 (+)
G176472 NA non-coding upstream 57048 3477908 ~ 3478177 (+)
G176466 NA non-coding upstream 65515 3469502 ~ 3469710 (+)
G176361 NA non-coding upstream 671856 2863024 ~ 2863369 (+)
G176502 NA non-coding downstream 369 3535923 ~ 3536286 (+)
G176503 NA non-coding downstream 1016 3536570 ~ 3537026 (+)
G176507 NA non-coding downstream 5171 3540725 ~ 3541052 (+)
G176509 NA non-coding downstream 7006 3542560 ~ 3542777 (+)
G176510 NA non-coding downstream 9735 3545289 ~ 3545750 (+)
G176377 NA other upstream 447257 2976862 ~ 3087968 (+)
G176346 NA other upstream 695172 2839760 ~ 2840053 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 1564834 1965603 ~ 1966435 (+)
G174949 NA other upstream 1920951 1613876 ~ 1614274 (+)
CI01000037_04213179_04218057 NA other downstream 677729 4212907 ~ 4218305 (+)

Expression


Co-expression Network