XLOC_000913 (gas6)


Basic Information

Item Value
gene id XLOC_000913
gene name gas6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 312784 ~ 338445 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001452
GCACAATGCAGGAGAGAtcgagagagagtgtgtgtgtgtgcatgagcgAGAGAGGGCGAACACATTGagcaagaaagagagagagagagtgtgtgtgtgcgcgcatgagAGATCGAgcgagagagagtgtgtgtgaatgtgagtgcgCCGCAGACAGACTCGCTCGCTGGGCTCTGGGTTGAATGCAGCGCTCAGTGCGGGATCATTGTGACCCAGAAGAGCGAAAGTTTGACGCAGTTTGTCCGCCATGAGGGAGCTGGTGTGGAGCTTCTGCCTCGTCCTGCTGTGTTCGGGCTTCTGCTCTCCCGTGTCCGTGTCCTCGCGCCAGGCCCACCAGTTCCTGCGCAGAACCCGCAGAGCCAACCAGGTGTTCGAGGAGACCAAACAGGGCCACCTGGAGAGGGAGTGTGTGGAGGAGAAGTGCACTAAGGAGGAGGCGAGGGAAGTGTTCGAGAATGACCCGGAGACGGAGTATTTCTACCCCAAGTATCAGGCTTGTATGGAGAGATTTGGGGATTCAGAGAAGAAGAAACAGGATTTGATTACCTGCGTTCAcaACATTCCAGACCAGTGTTCCCCGAACCCCTGCTATCATTACGGGACGGTGCGCTGCGAGGACAAAAAGGGCGAATTCCGCTGTCACTGCTTCACAGGATGGAGCGGCGCCACGTGTCAGAACGatgTGGACGAGTGCATCAGTGGAAACGGCGGCTGTGAGCACGTGTGTAACAACACTATGGGCAGTTATAAATGCTCCTGTGAGGACGGATACCGGCTGTCGGGTCACCACAGCTGTCTGGATGTGGACGAGTGTGTGGAGACTCCTGATGTGTGTGGAAGCGCTCACTGCTCAAACCTCATTGGTGGACTGGAGTGTCTGTGTGACGAGGGCTTCATCTATGATAACATCAGCAGGAGCTGTGTAGATGTGGACGAGTGTGAGACGCACGTGTGTGAGGAGGAGTGTGTGAACACGCCTGGAAGTTTCCGCTGCTTCTGTGACGGTCGTCTGGGAAAGAGACTGAGCTCAGACATGAGGAGCTGTGAGtccaTTAGTCTGGATCGGCCGCTGGACATGAGGAGAAACTCTCGCTCTCTGTATCTCGGCCGGATGTTCAGTGGTATTCCTGTGGTGCGACTCCGCTTCCGGCGCAGGGTTCAGACTGgTTTCACAGCAGAGTTTGACCTCAGGACCTTTGACCCCGAGGGCGTGATCTTCTTCGCTGGTGGACATTTGAACAGCTCCTGGATCGTTCTGCTGGTGCATCATGGGAAACTGGAGCTGCAGCTGAAGTACGGAGTCGTGAGTCGAGTGACCAGCAGCGGACCGCAGGTCAACGACGGGCAGTGGCACAAGATCTCGGTGGAGGAGCAGGGGCGGAGCCTGGTCATTAAGATTGACAGGGAGGCGGTGATGAAGATCGCAGTAAACGGAGACCTGTTCACTCTGAATAAAAACATGCACGAGCTGAACCTGACGGTGGGGGGAGTTCCCTTCAGAGACGATGGGCTGGTCAGCAGAgtTAACCCACGGCTGGACGGCTGTATGAAGGACTGGCGCTGGTTAACCGGTGAGGACACGTCCATTCAGGAAACCATCCGGCACAATGAACGCATGCAGTGTTACGCCGTCGAGGACCACAGCGCCTTCTACCCCGGACACGGGTTTGCATACTTCAACCACAGCCATGGAGACAATCAGACGCTCAGTGTTCATGTGACTCTGCGTGCCGCATCCTCCATGGGGGTTCTGTTCGCTCTGGTTCGTCAGGACAGAGTCCcgttctccatctctctctccgACTATCATCCAGGGACCCTCCAGTGGAccaagCATGTACTGGTGTCGTTGGGTGATGTGGTTGTGGGCAGTGTCCCAGTAAACCTCAGCGatggacaaacacacactgtGAATGTGACAATGTCCGGCAATGACTCCGTGCTGGAGGTGGATGCTCAGCTCGCTCAGATGGAGATGATGGAGGGTGTTGACTCTCTGGATCTCACATCCTCATACAGCACCTTCATAGGGGGCATCCCAGATGTTTCTCTGGTGTCGAGCCCCGTTTCTGCCTTCTTCACGGGCTGCATGGATGTGCGAGTGAATGGGCAGCTGCTGGATGTGGATGAGGCCCAACACAAACACAACGACATCCGCTCTCACTCCTGCCCTCTGGTGGACACACTGCAATAACAGCGGCTTTACCCTCATCTGGATCCACTGAGCGGTTCCTATAGGCCTTAATAAAGCCagatgcacaacacacacacaaacacagcacagCCGAGacgccacacacactcatgtattactcactgatgcTTCCATTAGACCAATCCAACACAAGCTACTGAGAGTGTGCTGTAAAATACTGTAACTGTACATATGCCAGTGTAAAATGCTTTAGAGGACTAAAAACACCCAACCGCCATAACAGGCCTGGAGAGGCTTGATGTAGGTGCTCTTCATCATCATTATCGTTCAGTTTGAGCGGGAGGTTTTCTAGTCCctcatttgttttttaatcttgtttttattgttgaaattgttttatatttttgttcatgtttgttcGCTCTGTGTGTGAGACTGAAACGCTTGTTGAAGacaaataaagttgaatgttgttattatta

Function

symbol description
gas6 Predicted to enable calcium ion binding activity. Acts upstream of or within sprouting angiogenesis. Predicted to be located in extracellular region. Is expressed in heart; nervous system; and neural tube. Orthologous to human GAS6 (growth arrest specific 6).

GO:

id name namespace
GO:0002040 sprouting angiogenesis biological_process
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko01521 EGFR tyrosine kinase inhibitor resistance
ko04052 Cytokines and growth factors

ZFIN:

id description
ZDB-GENE-030131-7773 Predicted to enable calcium ion binding activity. Acts upstream of or within sprouting angiogenesis. Predicted to be located in extracellular region. Is expressed in heart; nervous system; and neural tube. Orthologous to human GAS6 (growth arrest specific 6).

Ensembl:

ensembl_id ENSDARG00000007804

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001452 True 2637 mRNA 0.53 15 312784 338445

Neighbor

gene id symbol gene type direction distance location
XLOC_000912 dcun1d2b coding downstream 97873 208181 ~ 214911 (-)
XLOC_000910 FO681286.1 coding downstream 106576 160302 ~ 206208 (-)
XLOC_000911 grtp1a coding downstream 120751 184915 ~ 192033 (-)
XLOC_000909 pcid2 coding downstream 155221 152007 ~ 157563 (-)
XLOC_000907 FP067451.1 coding downstream 164938 108285 ~ 147846 (-)
XLOC_000914 pros1 coding upstream 4847 343292 ~ 354166 (-)
XLOC_000915 rasa3 coding upstream 19073 357518 ~ 411331 (-)
XLOC_000916 METTL21C coding upstream 115870 454315 ~ 462165 (-)
XLOC_000917 zgc:92518 coding upstream 128335 466780 ~ 471925 (-)
XLOC_000918 ercc5 coding upstream 135640 474085 ~ 494280 (-)
XLOC_000927 NA non-coding upstream 440130 778575 ~ 779614 (-)
XLOC_000929 NA non-coding upstream 667492 1005937 ~ 1014866 (-)
XLOC_000930 CU611053.1 non-coding upstream 712496 1050941 ~ 1051057 (-)
XLOC_000931 NA non-coding upstream 805517 1143962 ~ 1253194 (-)
XLOC_000932 NA non-coding upstream 952730 1291175 ~ 1315753 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_06116505_06128180 GAS6 coding CI01000299 null 6115638 ~ 6128450 (+)