Gene
RNA
| Item | Value |
|---|---|
| gene id | G183354 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000039 |
| NCBI id | null |
| chromosome length | 8355537 |
| location | 8199280 ~ 8199769 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| protein FAM107B isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU208216 | True | 490 | lncRNA | 0.40 | 1 | 8199280 | 8199769 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000039_08189467_08193070 | NA | coding | downstream | 6210 | 8189282 ~ 8193070 (-) |
| CI01000039_08175148_08187608 | SLC12A9 | coding | downstream | 11672 | 8174983 ~ 8187608 (-) |
| CI01000039_08160613_08163045 | NA | coding | downstream | 36235 | 8160480 ~ 8163045 (-) |
| CI01000039_08131887_08142840 | GC3, OLGC3, GUCY2D, OLGC5, GUCY2F | coding | downstream | 54168 | 8130840 ~ 8145112 (-) |
| CI01000039_08127858_08129554 | NA | coding | downstream | 69591 | 8127613 ~ 8129689 (-) |
| CI01000039_08214054_08244061 | MINK1 | coding | upstream | 14268 | 8214037 ~ 8244061 (-) |
| CI01000039_08253442_08273324 | PLD2 | coding | upstream | 53547 | 8253316 ~ 8273324 (-) |
| CI01000039_08280981_08287465 | CHRNE | coding | upstream | 81158 | 8280927 ~ 8287465 (-) |
| CI01000039_08306377_08310855 | PXMP2 | coding | upstream | 106139 | 8305908 ~ 8310855 (-) |
| CI01000039_08311824_08317719 | USP30 | coding | upstream | 111301 | 8311070 ~ 8317719 (-) |
| G183353 | NA | non-coding | downstream | 414 | 8198561 ~ 8198866 (-) |
| G183352 | NA | non-coding | downstream | 740 | 8198319 ~ 8198540 (-) |
| G183275 | NA | non-coding | downstream | 1759 | 8195978 ~ 8197521 (-) |
| G183350 | NA | non-coding | downstream | 34260 | 8164790 ~ 8165020 (-) |
| G183266 | NA | non-coding | downstream | 81135 | 8115579 ~ 8118145 (-) |
| G183355 | NA | non-coding | upstream | 44 | 8199813 ~ 8200040 (-) |
| G183273 | NA | non-coding | upstream | 2068 | 8201837 ~ 8204785 (-) |
| G183244 | NA | non-coding | upstream | 7280 | 8207049 ~ 8208406 (-) |
| G183360 | NA | non-coding | upstream | 122242 | 8322011 ~ 8322230 (-) |
| G183361 | NA | non-coding | upstream | 122506 | 8322275 ~ 8322583 (-) |
| G183261 | NA | other | downstream | 224235 | 7972116 ~ 7975045 (-) |
| CI01000039_07134422_07137732 | NA | other | downstream | 1061513 | 7134422 ~ 7137767 (-) |
| CI01000039_06647926_06651530 | NA | other | downstream | 1550704 | 6646544 ~ 6653449 (-) |
| G182827 | NA | other | downstream | 1564080 | 6634547 ~ 6635200 (-) |
| G182771 | NA | other | downstream | 1690847 | 6507955 ~ 6508433 (-) |
