XLOC_000941 (oxgr1a.1)


Basic Information

Item Value
gene id XLOC_000941
gene name oxgr1a.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 2048047 ~ 2051599 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001502
TGTGAGCATCAGCACCTGTCGTATTCAGCGCAATCATGTCTGGCAACCCTTACTATGACATGACCAACAATTCTTTGGACAACTGCACCGATGTGGACGACAAGGTGAAGCGCTACTATCTGCCAGCCATGTACGGTGCCATCTTCATAGTGGGTGTGATTGGAAACATCACAGCTCTTCTGGTGTATCTGCTCAAGGTTCGACCCTGGAAGAGCAGCACCATCATCATGGTGAACCTGGTCCTCACAGATCTCCTCTTCATGATCTCGCTGCCATTTTTAGTGTATTACTATGTGCTGAATGACTCGTGGACTCTGGGAATCACCGTGTGTCGCTTCGCCCGCTTCATCTTCCACTTCAACCTGTACGGCAGCATCCTCTTCCTCACATGCTTCTCCATTTTTCGCTATGTAGCAATCGTGCATCCGCAGCACTCACACAAGATTCGGCGCAAACGCTGGGGCGTTGTATCTTGTGCGCTGGTTTGGGTTGTTACAGTGGCTGAACTGAGTCCCATTTTTAATCTGTTTGCCACGATGGAGATCGATAACAAAACATACTGTTTGGATTTTGCGAGCAATGATGCTCAAAAGATTTGGCCGTATAGTTGGGTGTTGACAGTACTTGGCTATTTAGTTCCTTTAGTGGTGGTCTGTGTCTGCTATTGGCGCATCATCGAAAAGCTAAAGGAGGGTCCTCATATGGGGTGCAAAAAACGAGTGCGAGCGAGGAGATTCATTGTGCTCATTTTGACGTGTTTTGCGGTTTGTTTTCTTCCGTTTCATGTGCTGCGAGCGTTTAGAATCTACACGAGGCTCACGCCAGAGACGAACTGTATGCTGGATCATGGCGTTCATGCGGCTTACATCATCTCCAGACCAATCGCTGTGCTTAACATCATCTTCAACCTGCCGCTCTACACGCTGTCAGGCGATAGCTTTAAACAGGCCTTCGTGGAGATCTTCAAATGTGACAAGTTCAAGTCGAGCAATGAAAGGCTTGTTCAACTGGCGGTGATCAGCTAACGCATGCCCACATTATGAGCGAGAAGAGCAGCTGAGATTGAATTTTACGCTACATTAGTGAGCCAAAGTCAAAGACACTGTGAAATGGTATGATATGAAGGATATCCATCACATTAAACTGGACATTTGGACATTAATTATGCACTAATGACACTTATCACAATACAGGCCTGATTGACTTTGTATCTGCTGTGGGGAACAGCTACTATATTTTGTCATTAAgcgtaaaaaagtaaaatattgccAGACATATTTACAACAACAA

Function

symbol description
oxgr1a.1 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human OXGR1 (oxoglutarate receptor 1).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060421-6734 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human OXGR1 (oxoglutarate receptor 1).

Ensembl:

ensembl_id ENSDARG00000033684

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001502 True 1290 mRNA 0.46 2 2048047 2051599

Neighbor

gene id symbol gene type direction distance location
XLOC_000940 NA coding downstream 42512 2000666 ~ 2005535 (-)
XLOC_000939 si:ch211-132g1.3 coding downstream 119822 1870861 ~ 1928225 (-)
XLOC_000938 NA coding downstream 311483 1731517 ~ 1736564 (-)
XLOC_000937 clic6 coding downstream 416648 1618994 ~ 1631399 (-)
XLOC_000936 NA coding downstream 464841 1555296 ~ 1583206 (-)
XLOC_000942 oxgr1a.3 coding upstream 8831 2060430 ~ 2061419 (-)
XLOC_000943 oxgr1a.2 coding upstream 22914 2074513 ~ 2075529 (-)
XLOC_000944 NA coding upstream 42397 2093996 ~ 2101261 (-)
XLOC_000945 NA coding upstream 187612 2239211 ~ 2251036 (-)
XLOC_000946 si:ch211-235f1.3 coding upstream 280038 2331637 ~ 2334254 (-)
XLOC_000935 NA non-coding downstream 548654 1491941 ~ 1499393 (-)
XLOC_000933 CZQB01066256.1 non-coding downstream 695050 1350111 ~ 1352997 (-)
XLOC_000949 NA non-coding upstream 443422 2495021 ~ 2502744 (-)
XLOC_000950 CU986306.1 non-coding upstream 653005 2704604 ~ 2714275 (-)
XLOC_000952 NA non-coding upstream 1245008 3296607 ~ 3299853 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_00169255_00170695 NA coding CI01000299 null 169223 ~ 170986 (-)