XLOC_000942 (oxgr1a.3)


Basic Information

Item Value
gene id XLOC_000942
gene name oxgr1a.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 2060430 ~ 2061419 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001503
ATGTCTCTAAACCCTTACTACGGCCTGACTAACACATCGAACGACAACTGCACAGATGTGGACAACCTGGTGAAGCGCTACTATCTGCCAACCATGTATGCTATCATCTGCGTTGTGGGTGCTATTGGAAACATCACAGCTCTTCTGGTGTTTGTACTCAGGATTCGACCCTGGAGGAGCAGCACCATCATCATGGTGAACCTGATCTTCACAGATCTTCTCTTAATAATCTCCCTGCCGATTTTTGTCTACTATTATGTGCTGAATGACTCGTGGACTCTGGGAATCACCATGTGTCGCTTCTCCCGCTTCGACTTCCACTTCAACCTGTACGGCAGCATCCTAGCCCTCACATGCATCTCCGTTATTCGCTATGTAGTAATCGTGCATCCACAGCATGCAGAAAATATTAGCCGAAAACGCTGGGGCATCATGTCTTGCATGTTGTTTTGGATCATTACGGTAGTTGAACTTAGTCCAATTTTTAATCTTTTTGCAACAGTGGAGATCGATAACAAAACATACTGTTTGGATTTTGCGAGCAATGATCCACAGAGTGTTTGGCCGTATAGTTGGGTGTTGACTGTACTCGGGTTTTTAGTTCCTTTGGTGGTGGTCTGTGTCTGCTATTGGCGCATCATCGAAAAGTTAAAGGAGGGTCCTCATACGGGGAGCACCTCACGTTTATTGGCGAGGAGAGTCATTGTGTTGATTATTACGTGTTTTGCAGTTTGTTTTCTTCCGTATCATGTGCTGCGTGCATTTAGAGTCTACACGAGGCTCACGCCAGAGACGAACTGTATGCTGGATCATGGCGTTCATGCGGCCTACATCATCTCCAGACCCATCGCAGTGCTCAACATCATCTTCAACATGGTGCTGTACACGATGCAGGGCGGTAACTTTAAACAGGCTTTTGTGGAGCTCTTCAAATGTAAGAAACTCAAGTCGAAGACTGAAAGGACTGTTGAAATGGCGGTGATCAACTAA

Function

symbol description
oxgr1a.3 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human OXGR1 (oxoglutarate receptor 1).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090312-23 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human OXGR1 (oxoglutarate receptor 1).

Ensembl:

ensembl_id ENSDARG00000040247

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001503 True 990 mRNA 0.46 1 2060430 2061419

Neighbor

gene id symbol gene type direction distance location
XLOC_000941 oxgr1a.1 coding downstream 8831 2048047 ~ 2051599 (-)
XLOC_000940 NA coding downstream 54895 2000666 ~ 2005535 (-)
XLOC_000939 si:ch211-132g1.3 coding downstream 132205 1870861 ~ 1928225 (-)
XLOC_000938 NA coding downstream 323866 1731517 ~ 1736564 (-)
XLOC_000937 clic6 coding downstream 429031 1618994 ~ 1631399 (-)
XLOC_000943 oxgr1a.2 coding upstream 13094 2074513 ~ 2075529 (-)
XLOC_000944 NA coding upstream 32577 2093996 ~ 2101261 (-)
XLOC_000945 NA coding upstream 177792 2239211 ~ 2251036 (-)
XLOC_000946 si:ch211-235f1.3 coding upstream 270218 2331637 ~ 2334254 (-)
XLOC_000947 ggact.3 coding upstream 385577 2446996 ~ 2453185 (-)
XLOC_000936 NA non-coding downstream 477224 1555296 ~ 1583206 (-)
XLOC_000935 NA non-coding downstream 561037 1491941 ~ 1499393 (-)
XLOC_000933 CZQB01066256.1 non-coding downstream 707433 1350111 ~ 1352997 (-)
XLOC_000949 NA non-coding upstream 433602 2495021 ~ 2502744 (-)
XLOC_000950 CU986306.1 non-coding upstream 643185 2704604 ~ 2714275 (-)
XLOC_000952 NA non-coding upstream 1235188 3296607 ~ 3299853 (-)

Expression


Co-expression Network