XLOC_009489 (ftr72)


Basic Information

Item Value
gene id XLOC_009489
gene name ftr72
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 41752335 ~ 41756507 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018648
GTCAGCTTTTAGATCTGCCCTGCTGGTCAATTTGGCAAACCTGTAAAAGCAATAACATTTCATTTCTGCTGTCGAGATGTCTGAGTCGTCCTCGAGTCAGTATGTGGATCAGTTCAGCTGTCCAGTGTGTTTGGATCTGCTGAAGGAGCCGGTGACGATTCCCTGTGGACACAGTTACTGTATGAGCTGTATTACTGACTGCTGGAGCCTGAAGGAGCAGGGGCCGCCGTACCGCTGTCCTCAATGCAGAGAGAGCTTCAGTCAGAGACCTCTACTGAAGAAGAACACTCTGATAGCTGAGATGATGGAGACGCTGCAGAAGACGGCCTTACAGacgcctgctgctgctgctgctgctgtggaCTGTGATGTTTGCACTACAGAGAAGAACAGAGCTGTAAAGTCCTGTCTGCAGTGCTTGGCCTCCTTCTGCCAAACTCACCTGCAGCTTCACTATGAGTCTCCTGCGTTTATGAAGCACAAACTAGTGGACGCCTCCAGACACATTCAGGAGAACATCTGCCCCAGTCATGGGAGACCGCTGGAGATTTACTGTCAGGATGATCATCAGTGCATTTGTTATCTGTGCATGGTTGACAGTCATAAAACCCACAGTGTGGTGTCTGTGGATTCAGAATGGACTAGTAAAAAGAATGTGTTAGAGGAGATGAATCTGACGTGTGTAAAGCTGATCAAGGAGCGAGAGAAAGGACAGCGGCAACTCAGGACAGCTACGAAGCATCTAAAAAGTTCAGCCGAGGAGGCGGTGGAGAGGATGGAAAAGGTGTTCACTGAGCTCATCTGCTCTCTGGAGAAGAAACGCTCTGAGATTAAAGAGCAGATCAGAGCTCAGGAGAAGACCGAGACAGATCGAGCAGAGCAACTTCACCAACATCTGCATCAAGAGCTGACACAACTCAGAAAAACACAAGCAGAGATCCACAAACTGCTCACTACTGAAGACCACATCCACTGTCTGAAGAgctgtgagtctgtgtgtgttttacccACATTTGAAGATGTTCCCAGCTTCACTTCACACACTCATCTGTCTTTTAAAGACCTTTCAATCTCAGCATTCAGAGAAGCTTTAGAGGATGCCTGTCGACAGCAAACAGACACATTTTCTCAAGAAGtgtcaaATGTTCATGTTGTAAAGCCTCCAGAACCAATGACGTACAACCAATTTTTGTGTTATTTCTATCAGCCTCATCTGGATCCAAACACTGCACACAAAAATCTCATCCTGTCAGAAGAAAACAGGAGAATATCATATTCAGATACAGACCAGCaatatcctgatcatccagagcGGTTTGCTGTATACTGTAATGTCTTGTGTAAGGAGGGATTGACTGGTCGCTGTTATTGGGAGGTTGAGTGTAGTGGCAAAAAATGGGCTGTTGCAGTTTCTTACAAAGGAATCAGTCGTAAAGGAAACACTGATGACTCTAGACTTGGCTACAACAAGCAGTCTTGGAGattgagctgttttaaagagaatgtattttttaaacatgacagTGAAGTAGTCTCAGTCCCTGTTTTTGATTCCTCTAGAATAGGAGTGTTTCTGGACCACAGAGCAGGAATTttgtccttttacagcatctctGACACAATGACCCTCCTTCACAGAGTCCAGACCAGCTTCACTGAACCGCTGTACCCTGCGTTTGGGCTTCTGGAAGGTTCTATCAGGATCATTGAGCAGAGAAAATGTCTTTAAGACCAGGAGTCATCATCTGACTAATTGTCCAAATAAATTAATTCTCAGATTAAAAA
>TCONS_00018649
AACATTTCATTTCTGCTGTCGAGTGTTACGGTAATAAGTCGAGCCGACCTGAATAACGTGATGTCTGAGTCGTCCTCGAGTCAGTATGTGGATCAGTTCAGCTGTCCAGTGTGTTTGGATCTGCTGAAGGAGCCGGTGACGATTCCCTGTGGACACAGTTACTGTATGAGCTGTATTACTGACTGCTGGAGCCTGAAGGAGCAGGGGCCGCCGTACCGCTGTCCTCAATGCAGAGAGAGCTTCAGTCAGAGACCTCTACTGAAGAAGAACACTCTGATAGCTGAGATGATGGAGACGCTGCAGAAGACGGCCTTACAGacgcctgctgctgctgctgctgctgtggaCTGTGATGTTTGCACTACAGAGAAGAACAGAGCTGTAAAGTCCTGTCTGCAGTGCTTGGCCTCCTTCTGCCAAACTCACCTGCAGCTTCACTATGAGTCTCCTGCGTTTATGAAGCACAAACTAGTGGACGCCTCCAGACACATTCAGGAGAACATCTGCCCCAGTCATGGGAGACCGCTGGAGATTTACTGTCAGGATGATCATCAGTGCATTTGTTATCTGTGCATGGTTGACAGTCA

Function

symbol description
ftr72 Predicted to enable zinc ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041114-86 Predicted to enable zinc ion binding activity.

Ensembl:

ensembl_id ENSDARG00000026704

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018648 False 1785 mRNA 0.45 7 41752335 41756507
TCONS_00018649 True 587 mRNA 0.51 3 41755113 41756454

Neighbor

gene id symbol gene type direction distance location
XLOC_009488 ftr73 coding downstream 2971 41746720 ~ 41749364 (-)
XLOC_009486 ftr90 coding downstream 7487 41711727 ~ 41744848 (-)
XLOC_009487 ftr76 coding downstream 32120 41716721 ~ 41720215 (-)
XLOC_009485 si:ch211-276c2.4 coding downstream 43678 41693635 ~ 41708657 (-)
XLOC_009484 spsb4b coding downstream 62354 41670742 ~ 41689981 (-)
XLOC_009490 ftr91 coding upstream 935 41757442 ~ 41762565 (-)
XLOC_009491 slc25a36b coding upstream 11168 41767675 ~ 41807371 (-)
XLOC_009492 epha4l coding upstream 188803 41945310 ~ 42039192 (-)
XLOC_009493 si:dkey-96g2.1 coding upstream 286595 42043102 ~ 42048022 (-)
XLOC_009494 NA coding upstream 297332 42053839 ~ 42058846 (-)
XLOC_009483 NA non-coding downstream 84980 41640441 ~ 41667355 (-)
XLOC_009482 CR925731.1 non-coding downstream 208895 41529260 ~ 41543440 (-)
XLOC_009478 CR854897.2 non-coding downstream 356262 41393401 ~ 41396073 (-)
XLOC_009474 NA non-coding downstream 506326 41238245 ~ 41246009 (-)
XLOC_009472 NA non-coding downstream 680138 41068774 ~ 41072197 (-)
XLOC_009495 CR925728.2 non-coding upstream 307676 42064183 ~ 42066345 (-)
XLOC_009496 CR925728.1 non-coding upstream 323887 42080394 ~ 42086212 (-)
XLOC_009497 NA non-coding upstream 348935 42105442 ~ 42106950 (-)
XLOC_009498 LO018107.1 non-coding upstream 379580 42136087 ~ 42139836 (-)

Expression


Co-expression Network