XLOC_009499


Basic Information

Item Value
gene id XLOC_009499
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 42148976 ~ 42149580 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018844
GAGAATTACAATAATGATATTGTTTTATGATTTTAGTGCAACACTCACTCTACAaacttttaaaaccattttgaggTGTCTTCACAGTGTTAGCTGGAGCATCGGccttttattttcacacattatGTGAGACTAGAAGAGAGATCACACCAAAGAAGAGGGCTGGTCCAGACTCGACATAACCAAAACCACTTCCTTTTCACTCATATCACCCGTTTTCTGTGGAGATCGCACAGCATTATTCTGGACTTGCAAATTTGAAACAACAAACATGAGGTTTGCTTTGTTTCTGAATGGACTCCTGCTGCTCTTTCTGCTTCCCGACCGGACAGAAAGTGTTGAATCCCTGGACATCACAACTCTTGCTCGCATTATCAACTTCTTCGAACAGAAGTAAGTTTTTTTACAGTATCTATTGAAAATGAAACCCTCAAAGTTAGCAGTTAGGAAGTTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018844 True 454 lncRNA 0.39 2 42148976 42149580

Neighbor

gene id symbol gene type direction distance location
XLOC_009498 LO018107.1 coding downstream 9140 42136087 ~ 42139836 (-)
XLOC_009497 NA coding downstream 42026 42105442 ~ 42106950 (-)
XLOC_009496 CR925728.1 coding downstream 62764 42080394 ~ 42086212 (-)
XLOC_009495 CR925728.2 coding downstream 82631 42064183 ~ 42066345 (-)
XLOC_009494 NA coding downstream 90130 42053839 ~ 42058846 (-)
XLOC_009500 pax3b coding upstream 13776 42163356 ~ 42206890 (-)
XLOC_009501 NA coding upstream 70003 42219583 ~ 42225760 (-)
XLOC_009502 farsb coding upstream 115311 42264891 ~ 42283830 (-)
XLOC_009503 FP340266.1 coding upstream 379210 42528790 ~ 42528904 (-)
XLOC_009504 NA coding upstream 401843 42551423 ~ 42557997 (-)
XLOC_009507 CR457441.1 non-coding upstream 578890 42728470 ~ 42728586 (-)
XLOC_009509 BX890602.1 non-coding upstream 924343 43073923 ~ 43119191 (-)

Expression


Co-expression Network