G223843


Basic Information

Item Value
gene id G223843
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 2361044 ~ 2361448 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU253909
CTCACATCAAAGATGTTCCATCTGCAGAATGACATTTAACTTAAAGGGGGGGAGGTGTCACAGACAGTACAAAATGTTCTTTCTCCATCAGCTAAACCCCTTCAACAAGCCTCTATCCATTGAGGTGAGAGCTCACCTGCATTTCCACAGAGACATCCAGCAAGTCAATGGGCTCCCAAGGGCCTCGAAGCCAACTGAGAATGAGCCCCATGGCAACACAGACCTGACACTCCAGTAATCTCAACCCTTAAACTGACACTCACTGCGTGTATGTTCCTTTCTCACTCGCCCTGCCCTGTGCTGCTCTCAGTGTGTGGAAGCACTTGCGATGTCTGTGAAAGGACAGGAGAGGCTGAAGCAAAGCTCACAGGAAAAGAAGGGTGAGCTTTAAGGGCTTGGCACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253909 True 405 lncRNA 0.50 1 2361044 2361448

Neighbor

gene id symbol gene type direction distance location
CI01000052_02310477_02312424 LHFPL5B, LHFPL5, LHFPL5A coding upstream 48137 2309879 ~ 2312907 (+)
CI01000052_02182830_02186951 NA coding upstream 173866 2181940 ~ 2187178 (+)
CI01000052_02167466_02172193 ADORA1, ADORA1B coding upstream 188008 2166584 ~ 2173036 (+)
CI01000052_02120654_02122805 NA coding upstream 237784 2120360 ~ 2123260 (+)
CI01000052_02077422_02080093 PROK1 coding upstream 280709 2077422 ~ 2080335 (+)
CI01000052_02374792_02389760 NA coding downstream 13264 2374712 ~ 2390103 (+)
CI01000052_02397395_02408461 MGC78985, NCS1A, NCS1B, NCS1.L, NCS1 coding downstream 35947 2397395 ~ 2408539 (+)
CI01000052_02417407_02438433 HMCN2 coding downstream 55924 2417372 ~ 2438924 (+)
CI01000052_02439580_02463549 HMCN2 coding downstream 78132 2439580 ~ 2465673 (+)
CI01000052_02468269_02501109 HMCN2 coding downstream 106821 2468269 ~ 2501174 (+)
G223834 NA non-coding upstream 34226 2326583 ~ 2326818 (+)
G223807 NA non-coding upstream 40448 2315719 ~ 2320596 (+)
G223829 NA non-coding upstream 63183 2297629 ~ 2297861 (+)
G223828 NA non-coding upstream 65734 2294958 ~ 2295310 (+)
G223825 NA non-coding upstream 72488 2262794 ~ 2288556 (+)
G223801 NA non-coding downstream 10253 2371701 ~ 2371846 (+)
G223806 NA non-coding downstream 49860 2411308 ~ 2414717 (+)
G223808 NA non-coding downstream 53719 2415167 ~ 2415889 (+)
G223858 NA non-coding downstream 147691 2509139 ~ 2509435 (+)
G223863 NA non-coding downstream 155151 2516599 ~ 2516889 (+)
G223694 NA other upstream 256745 2049326 ~ 2104299 (+)
G223545 NA other upstream 1090117 1270492 ~ 1270927 (+)
G224953 NA other downstream 1069688 3431136 ~ 3460136 (+)

Expression


Co-expression Network