XLOC_000979 (arglu1b)


Basic Information

Item Value
gene id XLOC_000979
gene name arglu1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 7662091 ~ 7673376 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001552
ATGCTGGGATCTGAGATCAGCCATCCTCCATCTTGCTTTTTAACTATACAAGATAAATTGTATGCTGCAGATAAAATACCATTGTTATTAAACCATTTACTTCCAAATAAGAGTTCCGCCTTCGAGATTATTGTCATGCAGTCTGCGCTGATTCCTTAAATGTGCGATTTGGGGTTAGTGTGAAGGTCTAGCAGGTGTGTGTGTTCGTCAGTCCGATGCTTTAGTGGTGTTCAGTCTCCTGGCTTCTGCAACTCAACCGGCGTCTGAAATGGGTCGCTCGAGGAGCCGCAGCTCTTCCCGCTCCAAGCACTCCAAAACCAGTAAGCACAGCAAAAAGCGAAGCAGATCTCGATCGAGATCCCGGGACAGGGAGAGGAAGAGGCGCTCCAAGTCGCGAGAGTCCAAAAGGAACCGCAGGAGAGAGTCGCGCTCCCGGTCCAGATCAAACACGGCCACGTCTCGGCGGGACCGAGAGAGAGCCGCATCTCCGCCAGAGAGGATCGACATTTTCGGCAGGGCGCTGAGCAAGAGGAGCGCTGTGGATGAAAAGCAGAagaaagaagaggaggagaagaaAGTCGAAATGGAAAGACAGAGGAGAATTCGACAGCAGGAGATCGAGGAGCGGCTGATTGAGGAGGAGACAGCGCGGCGCGTTGAGGAACTTGTAGCCAAACGTGTGGAGGAGGAACTTGAAAAGCGAAAGGATGAGATTGAAAGAGAAGTGTTGCGACGGGTGGAGGAGGCCAAGCGCATCATGGAGAAGCAGTTGCTGGAGGAGCTCGAGAGACAGAGACACGCAGAGCTCGCAGCTCAGAAAGCTCGGGAGGAGGAAGAGAAATCCAAACGCGAAGAACTGGAGAAGATCCTGGTGGACAACAATCGCAAGATAGCCGACGCTCAAGCTAAACTGGCAGAGGACCAGCTACGAATAGTTGAAGAGCAAAGAAAAATACACGAGGAGCGTATGAAGCTGGAGCAAGAGCGACAGAAACAGCAGAAGGAAGAACAGAAGATGATTTTGGGGAAAGGGAAGTCAAGGCCTaaactttctttttctttaaaggCTTCTGAGTGACAAAAACAACGTGGCCAGGATTTCTCCAGACTTTCTCCAGACCACTCTCCGTGTGAGGCGATAAGTTCTCCGTAGGTCTCATGTGGTATTTCAAATTCTCAGAACAATGGGAACAATCATTTTGTCAAATACCCTTAAGTTTTTTCTCCCAGGTTTTAACTGTCTGTTTTGTATTGCTGACTCTTGTATAGATAACCTCCACTTGTCCTCCATGTAGCGTCTGCAACCACGTTTGGTGCACGACACGAGTAGAGTGAAAAAGAGCCGGCCTGGCCTGTTCTTTCATCCAAGTGTACAATATGAATTCCAGTTTCACTAATTTAAGACCACAACTGATTTTCCTTACCGAAAATTTGaagtacttttattttttttaatagtttattcatAGTATAATGGAAGTAGAATGAATTTGGCAGGGAAACAGCTTGAACTTGAAGTCCATCCCTCTATTTTGATTAGCACAGATCTGATTTAAAGGTAACCAGTCCGAGCAAGAAGCATCATAAAACAACAGTAACCTCCTTTTACCATTTTTACCTTCACTTTAATACACTCATACATACTTTCAAGTAATGTAGACTCGAGAGGTAAAGAGATGCTGTAAGAAAGGGTACCTGGTTGTTGCATGTCAATGAGCTGCGTTCTATGTTAGTGATGAAATGCTTTTATAGAGGCGATTGAGTGAAAGATTGCTGATTGGCCGGAGTTTGTGTTTGTGGTTAAATATTTGACCCAGTTATCAAGGATATGTCAAGAATCTCCAATAAATCCATGAATGTG
>TCONS_00001553
GCCTGAACTTCACTATTCGTCTCAGTTGCTTCTAAATATAAGTGATGAAAGTTGTTCACGCTTGTGTTCCTCCTATACTCCTATATTTGAGCTGACTGCTGCTCAGACGGCACTTCACTGTgtggccttttttctgagagtgagATGTAAGTAGAGAAGTACCGAGAACACAGGTCAGTAGCTTTAAAGACCCTCCATTGCTGATTGGTGGTACACtgcacaataaaacaacaacaaaaaacaagaacATATACCCAGTTTGACACTGACTTCTCTAGGAATTTTATTGGTGAGTGAAGGACAAGTGTACTGTAGGTTTACCCATTTCTGGTGAGCTGATTGTATCTTCTTTATCATTTATGTGTTTTCTCATGTTGATGATTAGTATTTCGGTTACTGCAACTTCATTGAAGCGTTTTGCGTTTGCAGGAGGAAGAGAAATCCAAACGCGAAGAACTGGAGAAGATCCTGGTGGACAACAATCGCAAGATAGCCGACGCTCAAGCTAAACTGGCAGAGGACCAGCTACGAATAGTTGAAGAGCAAAGAAAAATACACGAGGAGCGTATGAAGCTGGAGCAAGAGCGACAGAAACAGCAGAAGGAAGAACAGAAGATGATTTTGGGGAAAGGGAAGTCAAGGCCTaaactttctttttctttaaaggCTTCTGAGTGACAAAAACAACGTGGCCAGGATTTCTCCAGACTTTCTCCAGACCACTCTCCGTGTGAGGCGATAAGTTCTCCGTAGGTCTCATGTGGTATTTCAAATTCTCAGAACAATGGGAACAATCATTTTGTCAAATACCCTTAAGTTTTTTCTCCCAGGTTTTAACTGTCTGTTTTGTATTGCTGACTCTTGTATAGATAACCTCCACTTGTCCTCCATGTAGCGTCTGCAACCACGTTTGG

Function

symbol description
arglu1b Predicted to be active in mitochondrion and nucleoplasm. Is expressed in brain. Orthologous to human ARGLU1 (arginine and glutamate rich 1).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005654 nucleoplasm cellular_component
GO:0005739 mitochondrion cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-736 Predicted to be active in mitochondrion and nucleoplasm. Is expressed in brain. Orthologous to human ARGLU1 (arginine and glutamate rich 1).

Ensembl:

ensembl_id ENSDARG00000018319

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001552 False 1861 mRNA 0.46 4 7662091 7673376
TCONS_00001553 True 914 lncRNA 0.42 2 7662638 7668555

Neighbor

gene id symbol gene type direction distance location
XLOC_000978 efnb2b coding downstream 2221 7632119 ~ 7659870 (-)
XLOC_000977 mxb coding downstream 58357 7574351 ~ 7603734 (-)
XLOC_000976 mxa coding downstream 91910 7562316 ~ 7570181 (-)
XLOC_000975 NA coding downstream 107752 7545049 ~ 7554339 (-)
XLOC_000974 CABZ01075316.1 coding downstream 519948 7142039 ~ 7142143 (-)
XLOC_000980 NA coding upstream 26647 7700023 ~ 7701856 (-)
XLOC_000981 BX908756.3 coding upstream 98181 7771557 ~ 7844362 (-)
XLOC_000982 BX908756.2 coding upstream 128155 7801531 ~ 7801646 (-)
XLOC_000983 radil coding upstream 174411 7847787 ~ 7894255 (-)
XLOC_000984 mmd2b coding upstream 234906 7908282 ~ 7920702 (-)
XLOC_000973 CU571320.1 non-coding downstream 1208572 6453404 ~ 6453519 (-)
XLOC_000971 NA non-coding downstream 1261765 6398199 ~ 6400326 (-)
XLOC_000969 NA non-coding downstream 1488390 6159631 ~ 6173701 (-)
XLOC_000985 CR855320.6 non-coding upstream 246743 7920119 ~ 7920206 (-)
XLOC_000996 NA non-coding upstream 529014 8202390 ~ 8205228 (-)

Expression


Co-expression Network